Chiloscyllium plagiosum (whitespotted bambooshark): 122542048
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Entry
122542048 CDS
T08871
Name
(RefSeq) host cell factor 1-like
KO
K14966
host cell factor 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03083
Polycomb repressive complex
cpla04980
Cobalamin transport and metabolism
cpla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122542048
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
122542048
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122542048
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpla01009
]
122542048
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122542048
03029 Mitochondrial biogenesis [BR:
cpla03029
]
122542048
Protein phosphatases and associated proteins [BR:
cpla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122542048
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
122542048
HMT complexes
COMPASS/SET1 complex
122542048
MLL-HCF complex
122542048
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
122542048
Mitochondrial biogenesis [BR:
cpla03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
122542048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
122542048
NCBI-ProteinID:
XP_043535271
LinkDB
All DBs
Position
39:26797753..26846063
Genome browser
AA seq
1526 aa
AA seq
DB search
HPFPTCSHSPAFPILPASAFPVFANLQPTLPLFAHPFAPLPSSSPNAHVTRQGSVSEALH
QPAEWPPTLLLCDPVETFSPYVSNVICGFAGDFPAPCVCSPQLEREPCSLYLSDWPLRVL
AFPHVSTRLRLLHCPHSQLVAGVFAHAVCHPSPDLVACGVCALRCLAASRHKTRRCSPLS
PWRPSVGATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLFELQASR
WEWKKLKPKPPKNGSLPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDVYILE
LRPGSGVLSWDNPITYGVLPPPRESHTAIIYTEKTLKKSKLVIYGGMSGCRLGDLWTLDI
DTLTWNKPNVNGVSPLPRSLHSATVIGNKMYVFGGWVPLVMEDVKVATHEKEWKCTNTLA
CLNLDTMTWEPVVMETQEDNLPRARAGHCSVAINSRLYIWSGRDGYRKAWNNQVCCKDLW
YLETGRQEQTATLLPLTLHSPNNLHLPSNKSPTHTLPSVSLSLPGPTAVLRVASPQAPTV
LSSGSSLIAVRPTGNQGKVPVPVTTLSSGVHMVVSAQGSQGMTIGGATQMSGMAALAAAA
AATQKIPPTTISTVLGVPGSTMIKTVAVAPGSTLPATVKVASSPIMVSAAVLVSLGRHQH
LSATGASLIAPHPPPDEQVVVSRPLTSSKPHPPPPPPTPGGTPGVTSNTGMKSPITIFTT
KVMSTGTNSPAKIITAVPKISGGTSQQGLTQVLLKGAPGQPGTILRTVPVSGMRLVTPVS
VSAVKPAVTTLVVKSTTGVTTLGTVTGSLGGAAGVGAPTSLGTFSSQLINSAVITVSAAQ
SGLATASTPTVAMQAASEATRVTLIAAPTGVETSSIQELPVTILASPTMEQPSLVHVPES
GQTEGQASGSPPLVCSNPPHETSETNTTNTATTVTANMGANQVQPPPTNAQGLPETVHGE
TATAGTTNTATTVSAAQTGANTTVTQSTPAPGPSIPGVARISEGTDVTTSTEQPSPSTGE
QPLAPDPVSGPQSAPGEKAVPPGSTAESGPPLQTGEGTATEQLAPPQELMADAVTGLTPE
ELAVTAAAEAAEQAAVSQEVQALALQAVLQAAQQAAMGSGETMEMPDAKQQPAETDLAQL
SAVPSDAQQAALPLAVLAQHDLAVLVQQQQPQQQQQPQQLLSAGPSQPQLPTEALAPADS
LNDPSSETNGLGELAVPTVNVGTHPLLPPTTTEGLAPSSSLASPQPVSAASPSKLQAAAT
LAEVANGIEPSTTKGDAAPVTPKPPVKKDTNQWVDVGVIKGTTTVVTHYHLPPDGSPARD
DDSTPMPDYSQMKQQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKI
SKSPDGAHLTWEPPSMTSGKIIEYSVYLAIQSTQSMELKPSSPAQLAFMRVYCGPNPSCL
VQSANLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQGRFGNSACVTPLALLHYPP
RLRSLVFKLAIIEVNERIPATIMRGQ
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
catccctttcccacttgctcccactctccagctttcccgatcctccccgcttctgctttc
ccagtctttgcaaatcttcagcctactcttccactttttgcacatccctttgcccccctc
ccctcttcttcccccaatgctcacgtgacgaggcaagggagtgtttctgaggcactgcac
caaccggctgaatggcctcccacgctgctactctgtgatccggttgaaaccttttctcct
tatgtctcaaacgttatctgtggctttgccggtgacttcccagccccgtgtgtgtgttcc
ccacaactagaaagggaaccctgctctctgtacctgagcgactggcctctgcgcgtgctc
gccttccctcatgtaagcactcgcctccgtctcttacactgtccccattctcagcttgtg
gctggcgtctttgcccacgctgtgtgtcacccatctcctgacctggtggcgtgtggagtt
tgtgctctgagatgtttggctgcatcgagacacaaaacaaggaggtgctcaccgttgtca
ccttggcgtccgagtgtcggagccacgaatcaatggttcatcccagctgtgaggggtgac
attccgcccggatgtgctgcctacggttttgtgtgtgatgggacccgtctgctggtattt
ggaggcatggtggagtatggaaagtacagcaatgatctctttgaactgcaggccagccgg
tgggagtggaagaaactgaagcccaaaccgcccaagaatgggtcgttgccgtgtccacgc
ctaggtcacagcttttccctggtggggaataaatgctacctgtttggaggcctggccaat
gacagcgaggatcccaagaacaacattccacgttatctgaacgatgtttacatattggag
ctgaggcccggctcgggggtactgagctgggacaaccccatcacctacggagtgctgccc
cccccacgggagtctcacaccgccatcatctacaccgagaaaactctgaagaaatccaag
ttggtcatctacggaggcatgagcggttgcaggctcggagacctctggacattggacatc
gatacactaacgtggaacaaaccgaacgtgaatggtgtttccccactcccacggagtctg
cactcggctaccgtaatcggcaataaaatgtatgtatttggaggctgggtcccgttggtc
atggaagatgtgaaggtagccactcatgagaaggagtggaaatgcaccaacacgttggct
tgtctcaatctggacacgatgacctgggagccggttgtgatggagacgcaggaggacaac
cttccccgagctcgtgcaggccactgctcggtcgccatcaactcgcggctgtacatctgg
agcgggagggacggataccgcaaagcctggaacaatcaggtgtgctgcaaggacctgtgg
tacctggagacaggtaggcaggagcagactgcaaccctgctccctctaacactccactct
ccgaacaatctccatctgccctctaacaagtccccaacccacactctcccctcagtttct
ctctccctgccaggtccgacggccgttctgcgggtggcctctcctcaggcgcccaccgtc
ctgtcgagtgggagctccctgatcgccgtgcggccaacagggaaccaggggaaggtgccg
gtccccgtgacaacgctgtctagtggagtccacatggtagtgtcagcccagggcagccag
ggcatgaccatcggaggcgcgacgcagatgagtgggatggcagcactggcggctgccgca
gcggccacgcagaagatccctccgaccaccatctccaccgtgctcggcgtgcccggctcg
accatgatcaagacggtggccgtcgctcccggttccacgctgccagctactgtcaaggtg
gcatcctcccccatcatggtgagtgccgctgtgttggtcagcctgggccggcatcagcat
ttatccgcgacaggagcatcccttattgccccccaccccccccccgatgagcaggtggtg
gtgagccgccccttgaccagcagcaaacctcacccccccccccccccccccaccccgggt
ggtaccccaggggtcacgagcaatactggcatgaagtctccgatcaccatcttcaccacc
aaggtgatgtcaacgggcaccaacagccccgccaagatcatcaccgctgtgccaaagatc
agcggaggaacaagccagcaggggctgacacaggtattactaaagggagccccggggcaa
ccgggaaccattctgcgcaccgtcccggtcagcggtatgcggttagtgacaccggtatcg
gtctcggcagtgaaaccagctgtcaccacgctggtagttaagagcacgacgggtgtgacc
accttgggcacggtgacgggctctctcggaggggctgctggcgtgggcgcccccaccagc
ctgggcaccttctccagccagctgatcaactcggcggtcatcaccgtgtcggccgctcag
tccggcctcgccacggccagcacgccaaccgtcgccatgcaggctgcgtcagaagccaca
cgagtcacattaattgctgcgcccaccggggtggagacgtcatcaatccaggagttgccc
gtcaccatccttgcctcccctacaatggagcagccctcactggtgcacgtgcctgagagc
gggcagactgagggccaggcgtccgggagcccgcccttggtttgctccaaccctccccac
gagacgtccgagaccaacaccaccaatactgccacgacagtcactgccaacatgggcgcc
aaccaggtccagcctccgcccaccaacgcgcagggcctcccggagacagtgcacggggag
accgcgacagcgggcacaaccaacacggcaaccacggtgtctgcagcacagaccggggct
aacaccacggtgacacaatctactccagctcccgggccctccatcccgggcgtggcgagg
atatcggaaggcacagacgtcacaacgtcgacggaacagcccagcccctcgaccggcgaa
cagcctctggccccagacccagtctctggcccccagtcggctccaggggagaaggcagtg
ccgcctggctcaacggcagagagcgggcccccactgcagaccggcgagggcacagcaacc
gaacagctggcacccccccaggagctgatggcggacgcggtgacagggctgactccagaa
gagctggcagtcacagcagctgcagaggcagccgagcaggcagctgtctcccaggaggtg
caggcccttgccctccaggctgtactgcaggctgcccagcaggctgcgatgggttccggg
gaaacgatggagatgccagatgcgaagcagcaaccggccgagacggatttggcccagctg
agtgcagtgcccagcgatgcccagcaggcagcgctcccactggccgtgctggctcagcat
gatctggcagtcctggtacaacagcagcagccgcagcagcaacagcagccacagcagctc
ctgtcagccgggcccagtcagccccagctacccactgaagccctggcacccgcagacagc
ctcaacgacccctccagcgagaccaacgggcttggcgagctggcggtgcccaccgtcaat
gttggcacccacccgctcctccccccaaccaccacagagggcctggcaccgtccagctct
ctcgcctctccgcagccggtctcagcggcgagccccagcaagctgcaggcggctgcgacc
ctcgccgaggtcgccaacgggattgaaccctcgaccacgaaaggggatgcggcccctgtc
accccgaaaccccccgtcaagaaggatacgaaccagtgggtcgatgttggtgtgatcaag
ggcacgaccaccgtggtgacccattatcacttaccaccggacggttcgcctgccagagac
gatgattccacaccgatgccagactacagccagatgaagcagcaggagctccagccgggc
actgcctacaagttccgggtggcgggcatcaatgcctgtgggcgcgggccgttcagtgag
atctccgccttcaagacgtgtttgcctggtttcccgggggctccgtgtgccattaagata
agcaagagtccagatggagcccacctgacgtgggagccgccctccatgacatcgggaaag
attatcgagtactcggtgtacctcgccatccagagcacccagtcgatggagctgaaaccg
agcagcccagcgcagttggccttcatgagggtgtactgtgggcccaacccttcgtgcctg
gtccagtcggccaacctgtccaacgcccacatcgattacaccaccaaacctgccatcatc
ttcaggatagcagccaggaacgagaaagggtacggtcccgccacgcaggtcaggtggctc
caaggtaggttcggaaacagcgcctgcgttaccccactcgctctcctccattatcccccc
cgccttcgctctttagtctttaagttagcaattattgaagtgaatgagcggatcccagca
actatcatgaggggacagtga
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