KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122542048
Entry
122542048         CDS       T08871                                 
Name
(RefSeq) host cell factor 1-like
  KO
K14966  host cell factor 1
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03083  Polycomb repressive complex
cpla04980  Cobalamin transport and metabolism
cpla05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    122542048
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    122542048
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    122542048
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cpla01009]
    122542048
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cpla03036]
    122542048
   03029 Mitochondrial biogenesis [BR:cpla03029]
    122542048
Protein phosphatases and associated proteins [BR:cpla01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     122542048
Chromosome and associated proteins [BR:cpla03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    NSL complex
     122542048
   HMT complexes
    COMPASS/SET1 complex
     122542048
    MLL-HCF complex
     122542048
   Polycomb repressive complex (PRC) and associated proteins
    PR-DUB complex
     122542048
Mitochondrial biogenesis [BR:cpla03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    122542048
SSDB
Motif
Pfam: Kelch_3 Kelch_5 Kelch_4 Kelch_1 Kelch_6 Kelch_2 fn3
Other DBs
NCBI-GeneID: 122542048
NCBI-ProteinID: XP_043535271
LinkDB
Position
39:26797753..26846063
AA seq 1526 aa
HPFPTCSHSPAFPILPASAFPVFANLQPTLPLFAHPFAPLPSSSPNAHVTRQGSVSEALH
QPAEWPPTLLLCDPVETFSPYVSNVICGFAGDFPAPCVCSPQLEREPCSLYLSDWPLRVL
AFPHVSTRLRLLHCPHSQLVAGVFAHAVCHPSPDLVACGVCALRCLAASRHKTRRCSPLS
PWRPSVGATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLFELQASR
WEWKKLKPKPPKNGSLPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDVYILE
LRPGSGVLSWDNPITYGVLPPPRESHTAIIYTEKTLKKSKLVIYGGMSGCRLGDLWTLDI
DTLTWNKPNVNGVSPLPRSLHSATVIGNKMYVFGGWVPLVMEDVKVATHEKEWKCTNTLA
CLNLDTMTWEPVVMETQEDNLPRARAGHCSVAINSRLYIWSGRDGYRKAWNNQVCCKDLW
YLETGRQEQTATLLPLTLHSPNNLHLPSNKSPTHTLPSVSLSLPGPTAVLRVASPQAPTV
LSSGSSLIAVRPTGNQGKVPVPVTTLSSGVHMVVSAQGSQGMTIGGATQMSGMAALAAAA
AATQKIPPTTISTVLGVPGSTMIKTVAVAPGSTLPATVKVASSPIMVSAAVLVSLGRHQH
LSATGASLIAPHPPPDEQVVVSRPLTSSKPHPPPPPPTPGGTPGVTSNTGMKSPITIFTT
KVMSTGTNSPAKIITAVPKISGGTSQQGLTQVLLKGAPGQPGTILRTVPVSGMRLVTPVS
VSAVKPAVTTLVVKSTTGVTTLGTVTGSLGGAAGVGAPTSLGTFSSQLINSAVITVSAAQ
SGLATASTPTVAMQAASEATRVTLIAAPTGVETSSIQELPVTILASPTMEQPSLVHVPES
GQTEGQASGSPPLVCSNPPHETSETNTTNTATTVTANMGANQVQPPPTNAQGLPETVHGE
TATAGTTNTATTVSAAQTGANTTVTQSTPAPGPSIPGVARISEGTDVTTSTEQPSPSTGE
QPLAPDPVSGPQSAPGEKAVPPGSTAESGPPLQTGEGTATEQLAPPQELMADAVTGLTPE
ELAVTAAAEAAEQAAVSQEVQALALQAVLQAAQQAAMGSGETMEMPDAKQQPAETDLAQL
SAVPSDAQQAALPLAVLAQHDLAVLVQQQQPQQQQQPQQLLSAGPSQPQLPTEALAPADS
LNDPSSETNGLGELAVPTVNVGTHPLLPPTTTEGLAPSSSLASPQPVSAASPSKLQAAAT
LAEVANGIEPSTTKGDAAPVTPKPPVKKDTNQWVDVGVIKGTTTVVTHYHLPPDGSPARD
DDSTPMPDYSQMKQQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKI
SKSPDGAHLTWEPPSMTSGKIIEYSVYLAIQSTQSMELKPSSPAQLAFMRVYCGPNPSCL
VQSANLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQGRFGNSACVTPLALLHYPP
RLRSLVFKLAIIEVNERIPATIMRGQ
NT seq 4581 nt   +upstreamnt  +downstreamnt
catccctttcccacttgctcccactctccagctttcccgatcctccccgcttctgctttc
ccagtctttgcaaatcttcagcctactcttccactttttgcacatccctttgcccccctc
ccctcttcttcccccaatgctcacgtgacgaggcaagggagtgtttctgaggcactgcac
caaccggctgaatggcctcccacgctgctactctgtgatccggttgaaaccttttctcct
tatgtctcaaacgttatctgtggctttgccggtgacttcccagccccgtgtgtgtgttcc
ccacaactagaaagggaaccctgctctctgtacctgagcgactggcctctgcgcgtgctc
gccttccctcatgtaagcactcgcctccgtctcttacactgtccccattctcagcttgtg
gctggcgtctttgcccacgctgtgtgtcacccatctcctgacctggtggcgtgtggagtt
tgtgctctgagatgtttggctgcatcgagacacaaaacaaggaggtgctcaccgttgtca
ccttggcgtccgagtgtcggagccacgaatcaatggttcatcccagctgtgaggggtgac
attccgcccggatgtgctgcctacggttttgtgtgtgatgggacccgtctgctggtattt
ggaggcatggtggagtatggaaagtacagcaatgatctctttgaactgcaggccagccgg
tgggagtggaagaaactgaagcccaaaccgcccaagaatgggtcgttgccgtgtccacgc
ctaggtcacagcttttccctggtggggaataaatgctacctgtttggaggcctggccaat
gacagcgaggatcccaagaacaacattccacgttatctgaacgatgtttacatattggag
ctgaggcccggctcgggggtactgagctgggacaaccccatcacctacggagtgctgccc
cccccacgggagtctcacaccgccatcatctacaccgagaaaactctgaagaaatccaag
ttggtcatctacggaggcatgagcggttgcaggctcggagacctctggacattggacatc
gatacactaacgtggaacaaaccgaacgtgaatggtgtttccccactcccacggagtctg
cactcggctaccgtaatcggcaataaaatgtatgtatttggaggctgggtcccgttggtc
atggaagatgtgaaggtagccactcatgagaaggagtggaaatgcaccaacacgttggct
tgtctcaatctggacacgatgacctgggagccggttgtgatggagacgcaggaggacaac
cttccccgagctcgtgcaggccactgctcggtcgccatcaactcgcggctgtacatctgg
agcgggagggacggataccgcaaagcctggaacaatcaggtgtgctgcaaggacctgtgg
tacctggagacaggtaggcaggagcagactgcaaccctgctccctctaacactccactct
ccgaacaatctccatctgccctctaacaagtccccaacccacactctcccctcagtttct
ctctccctgccaggtccgacggccgttctgcgggtggcctctcctcaggcgcccaccgtc
ctgtcgagtgggagctccctgatcgccgtgcggccaacagggaaccaggggaaggtgccg
gtccccgtgacaacgctgtctagtggagtccacatggtagtgtcagcccagggcagccag
ggcatgaccatcggaggcgcgacgcagatgagtgggatggcagcactggcggctgccgca
gcggccacgcagaagatccctccgaccaccatctccaccgtgctcggcgtgcccggctcg
accatgatcaagacggtggccgtcgctcccggttccacgctgccagctactgtcaaggtg
gcatcctcccccatcatggtgagtgccgctgtgttggtcagcctgggccggcatcagcat
ttatccgcgacaggagcatcccttattgccccccaccccccccccgatgagcaggtggtg
gtgagccgccccttgaccagcagcaaacctcacccccccccccccccccccaccccgggt
ggtaccccaggggtcacgagcaatactggcatgaagtctccgatcaccatcttcaccacc
aaggtgatgtcaacgggcaccaacagccccgccaagatcatcaccgctgtgccaaagatc
agcggaggaacaagccagcaggggctgacacaggtattactaaagggagccccggggcaa
ccgggaaccattctgcgcaccgtcccggtcagcggtatgcggttagtgacaccggtatcg
gtctcggcagtgaaaccagctgtcaccacgctggtagttaagagcacgacgggtgtgacc
accttgggcacggtgacgggctctctcggaggggctgctggcgtgggcgcccccaccagc
ctgggcaccttctccagccagctgatcaactcggcggtcatcaccgtgtcggccgctcag
tccggcctcgccacggccagcacgccaaccgtcgccatgcaggctgcgtcagaagccaca
cgagtcacattaattgctgcgcccaccggggtggagacgtcatcaatccaggagttgccc
gtcaccatccttgcctcccctacaatggagcagccctcactggtgcacgtgcctgagagc
gggcagactgagggccaggcgtccgggagcccgcccttggtttgctccaaccctccccac
gagacgtccgagaccaacaccaccaatactgccacgacagtcactgccaacatgggcgcc
aaccaggtccagcctccgcccaccaacgcgcagggcctcccggagacagtgcacggggag
accgcgacagcgggcacaaccaacacggcaaccacggtgtctgcagcacagaccggggct
aacaccacggtgacacaatctactccagctcccgggccctccatcccgggcgtggcgagg
atatcggaaggcacagacgtcacaacgtcgacggaacagcccagcccctcgaccggcgaa
cagcctctggccccagacccagtctctggcccccagtcggctccaggggagaaggcagtg
ccgcctggctcaacggcagagagcgggcccccactgcagaccggcgagggcacagcaacc
gaacagctggcacccccccaggagctgatggcggacgcggtgacagggctgactccagaa
gagctggcagtcacagcagctgcagaggcagccgagcaggcagctgtctcccaggaggtg
caggcccttgccctccaggctgtactgcaggctgcccagcaggctgcgatgggttccggg
gaaacgatggagatgccagatgcgaagcagcaaccggccgagacggatttggcccagctg
agtgcagtgcccagcgatgcccagcaggcagcgctcccactggccgtgctggctcagcat
gatctggcagtcctggtacaacagcagcagccgcagcagcaacagcagccacagcagctc
ctgtcagccgggcccagtcagccccagctacccactgaagccctggcacccgcagacagc
ctcaacgacccctccagcgagaccaacgggcttggcgagctggcggtgcccaccgtcaat
gttggcacccacccgctcctccccccaaccaccacagagggcctggcaccgtccagctct
ctcgcctctccgcagccggtctcagcggcgagccccagcaagctgcaggcggctgcgacc
ctcgccgaggtcgccaacgggattgaaccctcgaccacgaaaggggatgcggcccctgtc
accccgaaaccccccgtcaagaaggatacgaaccagtgggtcgatgttggtgtgatcaag
ggcacgaccaccgtggtgacccattatcacttaccaccggacggttcgcctgccagagac
gatgattccacaccgatgccagactacagccagatgaagcagcaggagctccagccgggc
actgcctacaagttccgggtggcgggcatcaatgcctgtgggcgcgggccgttcagtgag
atctccgccttcaagacgtgtttgcctggtttcccgggggctccgtgtgccattaagata
agcaagagtccagatggagcccacctgacgtgggagccgccctccatgacatcgggaaag
attatcgagtactcggtgtacctcgccatccagagcacccagtcgatggagctgaaaccg
agcagcccagcgcagttggccttcatgagggtgtactgtgggcccaacccttcgtgcctg
gtccagtcggccaacctgtccaacgcccacatcgattacaccaccaaacctgccatcatc
ttcaggatagcagccaggaacgagaaagggtacggtcccgccacgcaggtcaggtggctc
caaggtaggttcggaaacagcgcctgcgttaccccactcgctctcctccattatcccccc
cgccttcgctctttagtctttaagttagcaattattgaagtgaatgagcggatcccagca
actatcatgaggggacagtga

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