KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122542049
Entry
122542049         CDS       T08871                                 
Name
(RefSeq) ras-related protein Rab-7a-like
  KO
K07897  Ras-related protein Rab-7A
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04137  Mitophagy - animal
cpla04140  Autophagy - animal
cpla04144  Endocytosis
cpla04145  Phagosome
cpla04148  Efferocytosis
cpla05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    122542049
   04145 Phagosome
    122542049
   04140 Autophagy - animal
    122542049
   04137 Mitophagy - animal
    122542049
   04148 Efferocytosis
    122542049
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    122542049
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cpla04131]
    122542049
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cpla04147]
    122542049
   04031 GTP-binding proteins [BR:cpla04031]
    122542049
Membrane trafficking [BR:cpla04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    122542049
Exosome [BR:cpla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122542049
  Exosomal proteins of other body fluids (saliva and urine)
   122542049
  Exosomal proteins of colorectal cancer cells
   122542049
  Exosomal proteins of bladder cancer cells
   122542049
GTP-binding proteins [BR:cpla04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    122542049
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA HdrB-like_C
Other DBs
NCBI-GeneID: 122542049
NCBI-ProteinID: XP_043535272
LinkDB
Position
39:complement(26845832..26850211)
AA seq 169 aa
ATIGADFLSHFFIVDGKNVCVQLWDTAGTERFHSLGSVLYRAVDCCVLVFDVTSEASFKA
LDSWRNEFLLQADPRDPDSFPFLVVGNKTDLRSSSSEVVSKRAEDWCSAHHLKYIETSAK
EALNVEAAFREGVRLALKRLRSEDQISDQFDQIQLTPDEETGQRTCACG
NT seq 510 nt   +upstreamnt  +downstreamnt
gccaccatcggagcagatttcctcagccacttcttcatcgtcgacggtaaaaacgtctgc
gtccagctctgggacacagccggcactgagcgtttccactcactgggctcagtcctgtac
agagccgtggattgctgtgtactggtgttcgacgtgacctcggaggcttccttcaaggcg
ctggacagctggcggaatgagttcctgctccaggctgaccccagggacccagacagcttc
ccgttcctcgtcgttgggaacaagactgacctaaggagcagcagcagcgaggtcgtctca
aagcgggcggaggattggtgcagcgcccaccatctaaagtacatcgagaccagtgccaag
gaagccctgaacgtggaggcggcgtttcgagagggcgtaaggctcgcattgaagcggctg
agaagtgaggaccagatctcggaccaatttgaccagattcagttgacgccagatgaagag
acagggcagaggacgtgtgcttgcggctga

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