Chiloscyllium plagiosum (whitespotted bambooshark): 122542075
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Entry
122542075 CDS
T08871
Name
(RefSeq) zinc finger and BTB domain-containing protein 20-like
KO
K10501
zinc finger and BTB domain-containing protein 20
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122542075
04121 Ubiquitin system [BR:
cpla04121
]
122542075
Transcription factors [BR:
cpla03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
122542075
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
122542075
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-Vps39_C
zf-C2H2_2
zf-C2H2_11
zf-UBP
zf-C2H2_15
B129_C2H2-zf
zf-Di19
Zf-C2H2_ZNF451_2nd
Zf-C2H2_ZNF451
DUF5810
zf-C2HC_2
DUF2225
zf-LYAR
BolA
Zn_ribbon_PriA
zf-C2H2_16
Zn_ribbon_SprT
Motif
Other DBs
NCBI-GeneID:
122542075
NCBI-ProteinID:
XP_043535330
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Position
39:578507..582745
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AA seq
380 aa
AA seq
DB search
METGRNSEVRALWYNTAANQRPEMTLLPQGSHSRKQRQPIRLQMADGSQVTIKEEDDDLL
YCGESISNATVSDQGAEHINQGEQTEDISETNAFDPNQSTMGDQRDSANHLSLSGKGDEL
EFFNASDLLPEELKSFWHGEKEEKEPSLPQNRKADCKSQLDTSYQRPSTFMQDFLPASTV
QNNPRNQGCSVQYDVQGDSNAASTASHRNLFQMNLPQSPHLPALPSTSQTCMPSISAQPS
CQNPPVFLDGGQTVSATPQASHSSSETEKKPYGCAQCGKTFSSRQNYAKHMFVHTGEKPH
QCSVCWRSFSLRDYLIKHMVTHTGVRAYQCPVCNKRFTQKSSLNVHMRLHRGEKAFECHV
CNKRFSHKTLLERHMATHII
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaggtcgtaacagtgaggtacgtgctctatggtacaacactgcagccaatcag
cgtccagagatgacattattaccacaaggtagccatagtcgcaagcagcgccagccaatc
cggctccagatggcagatggaagtcaagtaaccatcaaggaagaagatgatgatctcctt
tactgtggggagagcatttccaatgcaactgtctccgatcaaggtgctgagcacatcaac
caaggtgagcaaactgaggatatctctgagacaaatgcttttgatcccaaccaaagcaca
atgggggatcaaagagattctgccaatcatttgagtttgagtggcaaaggggacgagttg
gaatttttcaatgctagtgatctcttacctgaagaactgaagtcattttggcatggagag
aaagaggagaaggaaccctccttaccacaaaaccgaaaagcagactgcaagtcccaactt
gatacatcgtaccaacggccttcaacgttcatgcaagacttccttccagcatcgactgtg
cagaacaatccacgaaaccagggctgctctgtgcaatatgatgttcagggagatagcaat
gcggccagcactgccagtcaccggaacctcttccagatgaaccttcctcagtcacctcat
cttccagctttgccatccacctcacagacatgtatgcccagcatttcagctcagccatct
tgccaaaatccccctgtgttcctggatggaggccagacagtttcagctacccctcaggcc
agtcacagttccagtgaaactgaaaagaagccgtatggatgtgcacagtgtgggaagaca
ttcagttccagacagaattacgctaagcacatgtttgtccacacaggtgagaaaccccat
caatgcagcgtgtgttggaggtcattctcgcttagggactacttgataaagcatatggtc
acacatacaggagtgcgagcgtaccagtgcccggtgtgcaataaacgtttcacacaaaag
agctcgttgaatgtgcacatgcggctgcatcgtggcgagaaggccttcgaatgtcacgtg
tgtaacaagcgtttctctcacaagactttgctggaaaggcacatggccacccatattata
taa
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