Chiloscyllium plagiosum (whitespotted bambooshark): 122542095
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Entry
122542095 CDS
T08871
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cpla04054
]
122542095
Pattern recognition receptors [BR:
cpla04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
122542095
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_5
TIR_2
LRR_1
LRR_9
LRR_EndoS
LRR_NXF1-5
LRR_Zer-1
ThsB_TIR
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
122542095
NCBI-ProteinID:
XP_043535391
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All DBs
Position
39:1693903..1698155
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AA seq
961 aa
AA seq
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MPRPGRQLVGVFLLLLAFGELRRVSCLAFKHCVGKLVKHIFTCTHHNISELKEAVSDLPT
NVKVLNISFNSIRILYRQGLENLTQLELLRLDNNNLTTIHPKAFWKLSKLQLLNLSCNQL
DTLRQGIFKSLPNLTNLILKHNKLTGLSGEGILPLKRLSVLDISFNSLRNVSSFFAVLSG
FTGLRTLNAENNNISALEISSHFPPNLTHLLLANNTISRLQAPDTFFANIVHLDLSYNKL
SSSKELTSPKFTRLHFLNVQGNPLGKNGIIYTVQNLDAPLTNITLSHLALNDKATLEKLC
NIIQKKKIVALELKDNGLHKVSGAFSNCQGVLSLDLSHNQIKKPNIFGSLDIPNNLQVLN
LDHNSIRDVSLCGSWQNMNENRSSPCLENILHLTFRSNHISAIRSHAFQDLKNLRFLSLA
LNEINFINITAFVGLTNLRMLSLTNNAIGEIFHETFTNLVNLQSLKLRNNRIPIVYSKTY
SSLSNLTILDLGGNHIQNIKKGGFKGLKALEKLYLDRNWLSIVSQEMFEDLESLRVLDLA
NNKLSFHVGPLNFPPFIYLHNLQMLKLQSQESSGLSMLPHNLFDGLQQLKTLDISNNKFV
NLNTLPFYALTSLERLYMSDICNGFQTMHHLTFANLINLRHLILENVGLESIRKILFQNL
TSLNSLMLSSNMIHVIKEKDIPPLHNLTYLNLQFNPISCVCDNVWFQQWAINSRVQVAFF
YQYPCVDSGGKKTKHFAEFDSSVCNDGFVVFCATAAVIFAFMVTVVVYQKGKWSFHYGYY
LLQAWIHENKLQRNHTKGYKFDAFVSYNSKDEAWVFDQLMHNLENEGPPFHKLCFHHRDF
EVGKPIVENIVDAIYKSRKTICIISKNYLQSEWCSMEMQVALYRLFDEHSDVLILVFLDE
IPGYVLSSYHHLRKLVRKKTYINWPADESGQKLFWIKLRDALKKVCLASDESIPQLTQST
N
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtcctgggagacagctggttggagtctttctgctcctcttggctttcggggag
ttgaggcgggtgagttgcttggctttcaaacactgtgtcggtaaactggtgaagcacatc
tttacttgtacacaccataatatctcagagctaaaggaggctgtctcagaccttcctaca
aatgtcaaggttcttaatatctccttcaattcaatcaggattttatatcgccaaggtctg
gaaaatctaacccagctagaacttttgagactggacaataataatctgacaaccattcac
ccaaaggctttctggaaactcagcaaactccaactgctaaacttatcctgcaaccaactg
gacactctcagacaaggaatcttcaaatcccttcccaacctgaccaacttaatcctcaaa
cacaacaagttgactggtctctctggagaaggtattttgccattaaagaggttgagtgtt
ctggatatttctttcaacagtttaaggaatgtttcatctttctttgcagttcttagcggt
tttactggtctgagaactctaaatgctgaaaacaacaatatcagtgctttagaaatctcc
tcacatttccctcccaacctgacccacctccttctagccaataataccatctcccgactc
caggcacctgacacgttttttgcaaatattgttcacttggatttatcctacaacaaattg
tcaagctctaaggaattaacttcacccaagttcaccagacttcacttcctgaatgtgcaa
ggtaaccccttgggtaagaatgggattatttacactgttcaaaacttggatgcaccattg
acaaacatcaccctgtcacacctggcactgaatgacaaagcaacactggagaaactgtgt
aatatcatccagaaaaaaaagattgtggcattggaactgaaagacaatggacttcataag
gtgagtggtgccttcagcaactgtcagggtgttttgtctttggatttgtctcacaatcaa
atcaaaaagccaaacatttttggcagtttggatattccgaacaacctacaagtattaaat
cttgaccataattcaattcgagatgtctctttatgtggctcatggcaaaatatgaatgaa
aacagatctagtccatgtttagagaacatcctgcatctgaccttcagatccaatcacatt
tctgccattagatcgcacgcattccaagatttaaaaaacctgcgctttctttccttagct
ttgaatgagattaattttataaacattactgcgtttgtgggtctaaccaacctaagaatg
ctgtcactcactaacaatgcaattggagagatttttcatgaaaccttcactaaccttgta
aacctgcaatccctgaagctcaggaataacaggattcccattgtgtacagtaagacttat
tccagcctctctaatctgactatattggatttgggaggaaaccacattcagaatattaaa
aaaggaggttttaaaggactcaaggctttagaaaaactttatctggacagaaactggttg
tcaatagtttctcaagaaatgtttgaagatctcgaatccttgagggtattggaccttgcc
aacaataagttatcttttcatgtcggtcccttaaattttcctccattcatttatcttcac
aatctccaaatgctaaaattacaatctcaagagtcatctggtcttagcatgttacctcat
aatctgtttgatgggcttcagcagctaaagacacttgatatatccaacaacaagtttgta
aatctcaatacactgcccttctatgcacttactagtctagagaggttgtacatgagtgat
atttgtaatgggttccagacaatgcatcacttaactttcgccaacctgataaatcttcga
catctgattctggagaatgttggcttggaatccatcaggaaaatcctctttcaaaatcta
accagcctcaactctttgatgttgtcaagcaatatgatccatgtgatcaaagagaaggat
atccctccgttgcataatctcacctatctgaacctgcaatttaaccccatctcctgtgtt
tgtgacaatgtttggttccagcaatgggctattaactcccgtgtccaggttgcttttttc
taccagtatccatgtgtggacagtgggggtaagaaaacaaagcattttgcagagtttgac
agctcagtgtgcaatgatggctttgtggtgttttgtgcaacagccgcagttatatttgct
ttcatggtaacagttgtggtctaccagaaaggcaagtggagtttccactatggatattac
ttgctccaggcttggattcatgaaaacaaactccagaggaatcataccaaaggctacaag
ttcgatgcttttgtatcctacaactcaaaggatgaagcttgggtttttgaccaactaatg
cacaatctggagaatgaggggcctccatttcacaagctctgtttccaccacagggacttt
gaagtgggtaaacctattgtggaaaacattgttgatgccatctacaaaagcagaaagaca
atttgtatcatctccaagaattatcttcaaagtgaatggtgctccatggagatgcaagtc
gccttgtatcgactctttgatgaacacagtgatgtcctcatcttggttttccttgatgag
atccctggctatgtgctctcttcttaccatcacctacgtaagctggtgagaaagaagacc
tacattaattggcccgctgatgagtctgggcaaaagcttttttggatcaagttaagagat
gctctcaagaaagtgtgcctagcttctgatgaatcgattcctcaacttacccagtccaca
aactaa
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