KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122542128
Entry
122542128         CDS       T08871                                 
Symbol
polr2l
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC5
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03020  RNA polymerase
cpla03420  Nucleotide excision repair
cpla04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    122542128 (polr2l)
  09124 Replication and repair
   03420 Nucleotide excision repair
    122542128 (polr2l)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    122542128 (polr2l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpla03021]
    122542128 (polr2l)
   03400 DNA repair and recombination proteins [BR:cpla03400]
    122542128 (polr2l)
Transcription machinery [BR:cpla03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     122542128 (polr2l)
  RNA polymerase III system
   RNA polymerase III
     122542128 (polr2l)
  RNA polymerase I system
   RNA polymerase I
     122542128 (polr2l)
DNA repair and recombination proteins [BR:cpla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      122542128 (polr2l)
SSDB
Motif
Pfam: RNA_pol_N Chordopox_RPO7
Other DBs
NCBI-GeneID: 122542128
NCBI-ProteinID: XP_043535458
LinkDB
Position
39:complement(3974220..3975747)
AA seq 67 aa
MIIPVRCFTCGKVVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLSHVDLIEKLL
NYAPLEK
NT seq 204 nt   +upstreamnt  +downstreamnt
atgatcatcccggtccgctgcttcacctgcggcaaggtggtcggtaacaagtgggaggcc
tacctgggcctgctgcaggcagagtacaccgagggtgatgcgctagatgcattgggcctg
aagcgttactgctgcagacggatgttgctgtcgcatgtagacctgattgaaaagctcttg
aactacgcgcctctggagaaatga

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