Chiloscyllium plagiosum (whitespotted bambooshark): 122542273
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Entry
122542273 CDS
T08871
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cpla04054
]
122542273
Pattern recognition receptors [BR:
cpla04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
122542273
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_5
TIR_2
LRR_9
LRR_14
DHU1_N
CrtO
Motif
Other DBs
NCBI-GeneID:
122542273
NCBI-ProteinID:
XP_043535783
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All DBs
Position
39:complement(15833916..15848688)
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AA seq
946 aa
AA seq
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MARLRVDWPPLVCALSCIALAPVAPGYSFQNCIQSASHNGSFQCVHRFLRRVSGAVSDLP
PSALHLNVSHNLLSRLPAGSFGAVPGLLSLRLDYNRISWVEAGAFSNLSRLMVLNLSYNG
ISWLGPTDFLGLASLCQLLVDHNRLATVQPDAFAAPTGLQTLDMSFNRLGNFSRVVDSVA
ALRQLTCLDLSTNRLRSLRHSAPLPLSLRLLYLRNTSLGALDCRRDFLDRNFTLDVSDNN
ISRLSDVDLRKVAWLVVRNNPLDVSELLRSGNVDPQRVEYSGLRLGSFSELTKLCRHLGN
GTIQRLLLQNNQISYPALLSLKDCPPVKVWDLSHNFLTADNCLKFITQREQVTSFLLEHN
RIQRLSACCSERAAPFPKLTYLSYRYNRILAVPACAFSHAPGVRSLLLNINNIAVINRTA
FAELSQLLTLRLDNNLITDLHQETFSGLARLRTLNLRNNRVSIIFNNVFASLGSLDILDL
GGNKIRSLTGLSFGGLRNLTKLYLDRNSITHISGEIFSHLPSLRVLDLAKNWIRYNSGLA
TKAPFVHLGRLGILKLQAQQPYGINIIPPGFFRGLTSLRDLYLGENKMSLSSSRTFEGLV
NLRILSMPDTCNGVHSLDPGVFRNLRRLERLDLENVGLRFMSVDIFGGLANLRSLVLGKN
AIQTVNSSVLEHLPSLSYLDLRKNPFPCICSNGWFRNWSLSNPRVQVVYFYNQTCANQQR
EYLYKFDTRVCYLDFGHLMFEIILPVLLLFTFAPVVYAKGYWHIKYGLYILRSWLNDYRG
REESQQSYRYDAFISYNSNDEGWVLQELVPNLEDNGPQCFKLCLHHRDFELGKYIIDNIV
DSIYQSRKTICVMSRSYLESEWCSMELELASYRLFHELKDVVVLLFLEKIPEAELSTYHK
MRKVMKEKTYIQWPTDAEAQKLFWVKVRAAIKGSSRVKDRDAEVDS
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgactgcgtgttgactggccgccgctggtctgcgccctgtcctgcattgcgctg
gcgcccgtggcccctggctacagtttccagaactgcatccagagcgccagccacaacggc
tccttccagtgcgtccaccggttcctgaggcgggtctccggcgccgtctcggacctgccg
cccagcgccctccacctcaacgtctcccacaacctgctgagccggttgccagcgggcagc
ttcggcgcagtgccgggcctgctcagcctgcggctggactacaaccggatcagctgggtg
gaagccggggccttcagtaacctcagccggctgatggtcctcaacctctcctacaacggc
atatcctggctggggccgacggatttcctcggtttggccagcctgtgccagctgctggtg
gaccacaaccgcctggccacggtccagcctgacgcctttgccgcgcccacgggtctgcag
acgctcgacatgagcttcaacaggctggggaacttctccagggtggtcgactccgtcgct
gccctccgccagttgacctgcctggatctgagcaccaaccgcctgcgctccctccggcat
tccgcccctctgccgctctccctgcggctcctctacctccgcaacacctcgctcggcgcc
ctggactgccggcgggatttcctggaccgcaacttcaccctggacgtgtccgacaacaac
atctcccggctctccgacgtcgacctgaggaaggtcgcctggttggtcgtcaggaacaac
cccctggacgtctcggagctgctccgatctgggaacgtggacccccagcgggttgaatac
tccgggttacgactcggcagcttctcagagctcaccaagctgtgccgtcaccttggtaac
gggacgattcagcgcttgctcttgcagaacaatcagatctcctaccccgctctcctgtcc
ctgaaggactgcccaccggtcaaggtctgggatctgtcgcacaactttctgacggccgac
aactgcctgaagttcataacccagagggagcaagtcacatctttcctcttggagcacaat
aggattcaaaggctgtctgcctgctgcagcgagagggcagcccccttccccaaactgacc
tacctgtcttaccgctacaaccggattttggccgtgcccgcctgcgccttctctcacgcc
cccggcgtcaggagcctcctgctgaacatcaacaacatcgccgtcatcaacaggacggcc
ttcgctgagctcagccaactactgaccctccgcctggacaacaacctcatcacggacctc
caccaggagaccttctccgggctggcccgcctccgcaccctcaacctgaggaacaacagg
gtctccatcatcttcaacaacgtcttcgccagcctcggcagcttggatatcttggacctg
ggtggcaacaagatccggagtctcaccggcctgtccttcggcgggctccgcaacctgacc
aagctctacctggacaggaacagcatcacccacatcagcggggagatcttcagccacctc
ccgtctctgagggtgctggacctggccaagaactggatccggtacaacagcggcctagcc
acaaaggctccattcgtccacctgggcagactcggcatcctcaagctgcaggcccagcag
ccctacggcatcaacatcatccccccggggttcttcagaggcctcacctccctccgggac
ctgtacctgggagagaacaagatgtcgctgtcctccagtcgcacgttcgagggcctggtc
aacctgaggatcctctccatgcccgacacgtgcaacggcgtccacagtctcgacccgggc
gtcttccggaacctccgacgcctggagaggctggatctcgagaacgtcggcctccgcttc
atgtcggtcgatatcttcggcggcctcgccaacctcaggagcttggtgctgggcaaaaac
gccatccagacggtcaacagcagcgtgctggagcacctgccctccctgagctacctggac
ctgaggaagaatccgttcccttgcatctgcagcaacggctggttccgaaactggtccctc
tccaaccccagggtgcaggtcgtctacttttacaaccagacctgcgccaaccagcagaga
gaatacctgtacaagttcgacactcgggtctgttacttggactttgggcatctcatgttc
gaaataatcttgccggtgttgctcctgttcactttcgcccctgtcgtctacgctaaaggg
tactggcacattaagtacggactgtacattttacgctcctggctgaacgactacagggga
agggaagagagtcaacagtcctacagatacgacgctttcatctcctacaattccaatgac
gaagggtgggtcctgcaggagctggtgcccaacctggaagacaacggccctcagtgtttc
aaactctgccttcaccacagagactttgaactgggcaagtacatcattgacaacatcgtg
gacagcatctaccagagcaggaagaccatctgcgtcatgagccgcagctacctggagagc
gagtggtgctccatggagctagagctggccagctacaggctcttccacgagctcaaggac
gtcgtcgtcctgctcttcctggagaagattccggaagccgagctctccacctaccacaag
atgcggaaggtgatgaaggagaagacctacatccagtggccgacggacgcggaagctcag
aagctcttttgggtcaaagtgagggcagcgatcaaagggtccagtcgagtcaaagacagg
gacgctgaagtggacagttaa
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