Chiloscyllium plagiosum (whitespotted bambooshark): 122542294
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Entry
122542294 CDS
T08871
Symbol
rangap1b
Name
(RefSeq) ran GTPase-activating protein 1b isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122542294 (rangap1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122542294 (rangap1b)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
122542294 (rangap1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
DUF832
SDA1_dom
MCR_beta_N
PI3K_1B_p101
BUD22
Motif
Other DBs
NCBI-GeneID:
122542294
NCBI-ProteinID:
XP_043535828
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All DBs
Position
39:17860888..17918605
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AA seq
581 aa
AA seq
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MASEDISQLADALAKTQVGGGELSFKGRVLKLDTAEAAAEIIEEIEKFEHLQALRLEGNT
IGVEAAKAIAKSLSNKKELQKCYWSDMFTGRLRSEIPHALISLGDALMSAGAQLTLLDLS
DNAFGPDGIRSIEILLKSEVCYTLQELRLNNCGMGIGGGQILAAALSECHRLSSALGKPM
ALKVFIAGRNRLENEGAIALADAFKSIGTLEEVHMTQNGINHPGITALAKAFTENQHLRV
INLNDNTFTEKGAVAMAETLKALHNIEVINFGDCLVRSEGALAIAEAIKSGLQNLKELNL
SFGEIRKNAAIMVAEAVEHKYLLEKLDLNGNCLGEEGCDQLKEIMDSFNKHDVLGSLSDD
ESDGDEDEEVEEEDDDDDDLEEEEEDEDEEAEDDGGGEEQEQEKTTRVDQLIVDTPVKTI
PITPTSEAANFLSFPSPDKLVKMGSKRSLLLLQQTDLSNAEKVVQTFLKVAAVYKEDQET
KAAVFETADELLQKAFKTTGFELDMFITSLLVYMGLLKSEEKIKTVGNLIGPLTVLKHVI
QKSYFPRSVIPILHAFLTKHNHAFDSCQNAKYTLLETMQNL
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgaggatatctctcagctggcagatgcccttgcaaagactcaagtgggtggg
ggagagctgagtttcaaaggtcgtgtcctaaaacttgacacagctgaagctgctgctgag
attattgaagagattgagaaatttgaacacctgcaagcgttacgcctagaaggaaacaca
attggcgtggaagctgctaaagctattgccaaaagtctgtcaaataaaaaggagctgcag
aaatgctactggagcgatatgttcaccggccgactgcgttcggagatcccacatgctctg
atatcgctgggtgatgcactgatgagtgcaggagctcagctgacactactggatctaagt
gacaatgcatttggaccagatggaattcggagcattgaaatcttattgaagagtgaagtg
tgttacacattgcaggagctacgtctgaataactgtggcatgggaattggcggtggacag
attcttgctgctgcacttagtgaatgccaccgtctgtcaagtgccctgggaaagccaatg
gcactgaaagtttttattgctgggaggaatcgtctggagaatgaaggtgccattgcactg
gctgatgcttttaagtccataggaactctggaggaggtacacatgacccaaaacggaata
aaccatccaggtattacggctttggctaaggcattcactgaaaaccagcacctgagggtc
ataaaccttaatgataacaccttcacagagaaaggagctgttgccatggctgagacgcta
aaggcgctccataacattgaagtcataaattttggagattgtcttgtacggtcagaagga
gctctagcgattgctgaagcaataaagtctggattgcagaatctcaaggaacttaacctt
tcatttggagagatccggaagaatgctgcaatcatggtagctgaagctgtggagcataaa
tacttgctggagaaacttgatctaaacggtaactgtcttggtgaggaaggctgtgaccaa
ttgaaggaaattatggacagcttcaacaagcatgatgtgctgggttctctcagtgatgat
gaaagtgatggggatgaggatgaagaggtggaggaggaggatgatgacgatgacgacctg
gaggaggaagaggaagatgaagacgaagaagcagaagatgatggaggtggagaagaacag
gagcaagagaaaacaacacgagttgatcaattgatagttgacacacccgtgaaaaccatc
ccaattaccccgacatcagaagccgccaatttcttgtcttttccatctccagacaaactt
gttaaaatgggatctaaacggtcacttctgttactgcagcagactgatctgtcaaacgcg
gaaaaggttgtccaaacgtttctgaaggtggctgcagtctataaggaagaccaggaaacc
aaagcagcagtattcgagactgcagatgaactgttgcagaaagcattcaagactactgga
tttgagttagatatgttcattacttctctcttggtgtatatgggacttctgaagagtgaa
gagaagattaaaacggttggtaatctaattggacctttgacagttctcaaacacgtgatt
cagaaaagctactttccacgctctgtgattcccatcctccatgctttccttactaaacac
aatcatgcttttgactcctgccaaaatgcaaaatacactttgttggagactatgcagaat
ctttaa
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