Chiloscyllium plagiosum (whitespotted bambooshark): 122542490
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Entry
122542490 CDS
T08871
Name
(RefSeq) protein ERGIC-53-like
KO
K10080
lectin, mannose-binding 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122542490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122542490
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cpla04091
]
122542490
Membrane trafficking [BR:
cpla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
122542490
Lectins [BR:
cpla04091
]
L-type lectins
122542490
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Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
Lectin_legB
ANC1_spectrin
DUF3512
Motif
Other DBs
NCBI-GeneID:
122542490
NCBI-ProteinID:
XP_043536200
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Position
40:9885685..9957814
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AA seq
487 aa
AA seq
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MVVCVLLLLAWLPAPILSLKPVSAHRRFEYKHSFKGPHLVLQDGTIPFWTHHGNALPSSE
RIRVVPSMKSQSGSVWTKSNAAFENWEIEVSFRISGRNRIGADGLAIWYTREKGPTGPVY
GAVDHWDGVGIFLDTYDNDGKMNNPAILVVGNDGRLTYDHLNDGGSQTLGSCFRDYRNIY
HAVRIRVRYYQKTLQVHLNMGQTDLDESYELCTEVKDMNLPSSGYFGISAATGGVADDHD
VLSFLTFSLTEPGTMDPSSQLPSVEQEEYQKEYERFEKDLEKRKDEFQKEHPELQTPDEE
AFETEGQREFQMIAGGQRMIHEELEKLRERLDAAFTEQRRHSDYLSRMGKDERTTTAGGH
PEQDTGGSERLALLLNGQKEMVQQVQEISVNIADMLSKMRQSQQSLNAITEDKSHVNEIQ
EHIHVVKNGINSLTNTKVQQVSCPKVPPIPSCTSAWHFLVFIVLQSVFFLSYLIHRNRRE
INSKKFF
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgtgtgtgttgctcctgttggcctggctccctgctcccatcctcagcctgaag
ccagtgagcgcccaccgccgcttcgaatacaagcacagcttcaaaggtccgcacctggtg
ctgcaagatggtaccatccctttttggacccaccacggcaatgcccttcccagctctgaa
cgcattcgagttgttccctcaatgaaaagccaaagtggatcagtttggaccaagagtaat
gcagcgtttgagaactgggaaatagaagtttcatttcggataagtggcaggaacagaatt
ggagctgatggattggccatatggtataccagagaaaagggaccgacagggccggtttat
ggcgcagttgatcactgggatggagttggcatcttccttgacacatacgacaatgacggc
aagatgaacaatccagccatccttgtggtaggaaatgatggacgtcttacatatgatcac
ttgaatgacggaggaagccagaccttgggctcctgtttccgtgattatcgcaacatctat
cacgctgtgagaatcagagtaaggtattaccagaagacattacaggtacacttaaatatg
ggccagactgatctcgacgagagctacgaattgtgcacagaagtgaaggatatgaacctt
ccttcgagtggatactttggcatttcagcagccactggaggagttgctgatgaccatgat
gttctgtcctttctcacattcagcttgacggagcctggaacaatggatccttcaagccag
ctccccagtgtagagcaggaggagtatcaaaaggagtatgagcgctttgagaaagacttg
gagaaacgtaaagacgaatttcagaaagaacacccagagttgcagacaccagacgaagag
gcgtttgagacggagggtcagagggagtttcagatgatcgccggagggcagcggatgatc
cacgaggagttggagaaacttcgagagaggttggacgctgcgtttacggaacagaggcgg
cactcggattacctgagcaggatgggcaaggacgagcggaccaccacagcaggaggacat
ccagagcaggacaccggtggctccgagagactggcattgctgcttaacggtcaaaaggag
atggttcagcaagtgcaagagataagtgtcaacattgcagacatgttatccaagatgagg
caaagtcagcagtcgttaaatgccatcactgaagacaaaagccatgtcaatgagatccag
gaacacattcacgtcgtgaaaaatggcattaacagcttaactaacactaaggttcaacaa
gtcagctgcccgaaggtcccacctattccatcatgtacttcagcttggcatttcttggtg
ttcattgtcctccagtctgtattctttctctcttacttaatacacaggaatagaagagaa
atcaattccaagaaatttttctga
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