Chiloscyllium plagiosum (whitespotted bambooshark): 122542519
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Entry
122542519 CDS
T08871
Name
(RefSeq) neogenin-like isoform X1
KO
K06766
neogenin
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04350
TGF-beta signaling pathway
cpla04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122542519
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122542519
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpla04515
]
122542519
Cell adhesion molecules [BR:
cpla04515
]
Immunoglobulin superfamily
DCC/UNC5 family
122542519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
ADP_PFK_GK
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
Tissue_fac
Ig_5
C2-set_2
Ig_4
SusE
Sp38
TMEM154
GBS104-like_Ig
EphA2_TM
Glycos_transf_N
Motif
Other DBs
NCBI-GeneID:
122542519
NCBI-ProteinID:
XP_043536280
LinkDB
All DBs
Position
40:12387140..12598468
Genome browser
AA seq
1823 aa
AA seq
DB search
MWRTAAVAALLAITLHLLISYYPMDTPVEAVRILSDYLFGQRVVREPEELVAEAWDSLIR
APSNGWSRVAVGVNACVDVVVCGLGLLKALALDSGNKVDHNTLQSREHLKETFSYFMDKG
VAAERFFTDKELFQSIAQTASQFPGAKHFVGGNAALIGQKLSTNLNLSVLLCGPVGPKLR
ELLDDRIIVPAESLQEVDEYHLILEYQSGDEWGSIKAPQANRFIFSHDVSNGEMNMMETL
ISSLEEFEPELVVLSGLHMMEGQGKEERNKRLQQVSVLISEIPNEISVHLELASMTDKTY
MNTIVDQQVLTIVNSIGLNEQELLFISQAGSGPHSSQKHWNGAPDIGMMRVIIPFLMDLL
MVPDRSILFYTPIRSWPIKSHRAEYNSAESMIRTFTPFYFTVEPADTVAIRGASVILNCS
VFAEPRAKIEWRKDGTFLNLVSDERRQMLPEGSLLIRSVVHSKHHKPDEGFYQCVATIDS
LGTIVSRTAKVTVAGLPRFSGQPQAVFVHQGDTTLLGCEVNSDLVPFVRWEHNRQPVVLE
GRFLKLPSGSLEIGNVSDSDAGSYRCSVETAGLSKMSEETELTISPEIGVERKMKFLQQP
VPISKIAGQTVILPCVVSGYPTPTIHWSRNSETIFERFQKITLVGSGSLQISDVSEDDAG
IYNCIVENGNETMHAQTELSVQVPPQFLKRPANIYAHESMDIVFECEVIGSPMPTVKWIK
NGDMVIPSDYFKIVNERNLQVLGLVKSDEGLYQCVAENDVGNERASAQLIILEHDVPIPT
FPPPSLTSATADHLAAAAAGHLPSAPRDVMALLVSTRFIKLTWRPPAEPHSEILTYSVYY
SRDGTNRERVENTSRPGDLEVTIGDLMPDVKYVFRVVAHNKHGAGESSAPFKVATQPEVQ
VPGPAQNLVAQANSPTSITVTWQEPHSVNGPIINYKLYYMEKGADSEQDVDVGSLSYTMN
GLKKFTEYSFRVVAYNKHGPGVSTEDVVATTYSDVPSAPPQNVTLEVRNSKSIVVHWQPP
PPGTHNGVITGYNIRYKKGGRRGETDTTGGSQLSQIIDGLERNTEYSFRVSATTVNGTGP
ASDWVSAETFESDLDESRVPDKPSSLHVRPLINNIVVSWTPPENQNIVVRGYTIGYGIGS
PHAETIRVDYKQRYYTIGNLEPNSHYVIALKAYNRNGEGIPLYESTATRPLTDPFDPSEV
YIFDLFNNPYTPVPDPSPMLPPVGVQATVLTHDTIRVTWADSSLPKNQKIIDARFYTVRW
KTNYPANTKYKTADTTTLSYIVSGLKPHTLYEFSVKVTKGRRSSTWSMTAHGTTFETVPT
SPPKDLTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDISAEIHDWVIEPVVGDRL
THQIQDLTLDTSYFFKIQARNSKGMGPLSEFVQFRTPKAESSDKMANDQALGSSGKFGKI
PPMMDSGSDTRHSISGHNSPHGSPTSSLDSNMMLIIIISAGVFTIIIVVIIALICTRRTN
YQQKKKRAACKSANGSHKYKGNSKDVKPPDLWIHHERLELKPIDKSPDPNPVMTDTPIPR
NSQDITPVENAMDKDHQRRNSYLGRELEDGMSTLSGRRGLRPKMMMPFDTQPPQPVISAH
PIHSLDNPHHHHLCDGPSSPTRSYLRHQISSRPLGPSVDRANSTESVRNTPNSDMSPAPT
SQAHPVESIEADVPAVSYLPGSQEEESNRSVPTAHVRPSHPLKSFAVITIPPVSTNYETA
SSSTPLLSQTGPNPQVHSVKTASIGTLGRSRSPMAVTVPSAPDVAESTKMLEDSDSNYGP
DELTEEMTHLTGLMKDLNVITTA
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atgtggagaaccgccgcggtggcggcactgctggccatcactctccacctgctcatctcc
tattacccgatggatactcctgtggaggccgtgcgaatcctgtccgattacctgttcggc
cagagggtggtgcgggagcccgaggagctggtggctgaggcctgggactcgctcatcaga
gcaccgagcaatggctggagcagagtggctgtaggtgtgaatgcctgtgtggatgtggtg
gtgtgtggacttggacttttgaaagcactggcattggattctgggaacaaagtggaccat
aacacacttcaatcaagagaacatttgaaggaaactttctcttacttcatggataaagga
gttgcagctgaacgattcttcactgacaaagaactctttcaaagcattgcacagactgcg
tctcaattcccaggagctaagcactttgttggaggaaatgctgccctgatcggtcagaag
ctgagcacgaatctaaacctctcggtgctgctgtgtggtccagttggccccaagcttcgt
gaactcttggatgatcggattattgtcccagcagaatcattgcaggaggtggatgagtat
catctcattctggaatatcagagtggagatgagtgggggtcgattaaagcacctcaggcc
aaccgcttcattttttcccatgatgtgtcaaatggagagatgaacatgatggagacctta
atatcaagtctggaggaatttgaacctgagctggttgtcctttcgggtctgcacatgatg
gagggacaggggaaggaagaacgaaataagagactacagcaggttagtgtgttaatctca
gagataccaaatgagatttcagtacacctggagctggccagcatgaccgacaagacgtat
atgaataccattgttgatcagcaggttcttaccattgtaaactcgattggcctgaatgag
caagagctgttgttcatcagtcaggctggttcaggacctcactcctcgcagaagcattgg
aatggggctcctgatattggaatgatgagggtgataatacctttcctcatggatttgctc
atggtacctgacagaagcatactgttttacacccccatcaggtcctggccaatcaagtct
cacagagccgaatacaactcggctgaatctatgatccgaacattcacccctttctacttc
acggtggagccagcagacacagtagcaatacgaggggcctccgtaatactgaactgttca
gtgtttgctgaacccagggccaaaattgaatggagaaaggatgggacattcctaaacctg
gtttcagatgaacgcaggcagatgcttccagaaggttcactgttaatacggagcgtagta
cattccaaacaccacaaacctgatgaaggattttatcagtgcgtcgctactatcgatagc
ctggggacaattgtgagtcggacagcaaaggtaacagtggcaggtcttccccgattcagt
ggtcaaccccaagctgtctttgtgcatcaaggcgacaccaccctgttaggatgcgaggtg
aatagtgatcttgttccttttgtgaggtgggaacacaaccgtcagcctgtagtgttggaa
ggaaggttcctcaaactgcccagtggctccttggagatcggcaatgtctctgacagtgat
gctggatcgtaccgctgctctgtggaaaccgccggtctctctaaaatgagcgaagagaca
gagctcaccatttcaccagagataggtgtagagcgaaagatgaagtttctccaacaacct
gttcccattagtaagatagcaggccagacagtaatattaccttgtgtggtctctggctac
ccaacccccaccattcactggagccggaattcagagaccatctttgaaaggttccagaag
atcactttggtcggaagtggtagtctacagataagtgatgtctcagaagatgatgctggg
atttacaactgcattgtggagaatgggaatgaaacgatgcatgctcaaacagagcttagt
gtgcaagttcccccgcagttcttgaagcgtccagcaaacatttatgctcatgagtccatg
gacatcgtgtttgaatgcgaagtgatagggtcaccaatgccaactgtgaagtggataaag
aatggggacatggtcatccccagtgactattttaagattgttaatgagcggaacctgcag
gttcttggtctggtaaaatctgatgaaggtctgtatcagtgtgtggcagagaacgatgta
gggaatgaacgggccagtgcgcagctcatcatcttggagcatgatgttcccattccgaca
tttccccctccctcactgacaagtgccactgctgaccatctagcagctgccgcggctgga
cacctgccgtctgcccctcgggatgtgatggcactccttgtctccacacggttcatcaag
ttgacttggcgcccacccgcagagcctcattcagagatcctcacatactcggtctattac
tccagagatggcaccaacagggaacgtgtggaaaatacaagtcgacctggagacttggaa
gtgacaattggtgatttgatgccagatgtgaaatatgttttccgagtggttgctcacaat
aaacatggagcaggagagagttctgctcctttcaaagtggccacccaacctgaagttcaa
gtgccgggaccagctcagaacctggttgcacaagcaaactcgccaacctcgatcacagtc
acctggcaggagcctcactcagtcaatgggccaatcataaactacaaactttactatatg
gagaaaggggctgacagtgaacaggatgtagatgttgggagtctttcctacaccatgaat
gggttgaagaaattcactgaatacagtttccgggtagtggcttacaacaagcatggacca
ggagtctccactgaggatgtggtagcaacaacctattctgatgttcccagtgcaccccct
cagaatgtcacgttggaagttcgcaattccaagagcattgtggtgcactggcagccaccg
cctccaggcacccacaatggtgtgatcactggttacaatattcgatacaaaaaaggcggt
cggcgtggtgagactgacaccacaggaggaagccagctttctcagataatagatggattg
gaacgaaatactgagtacagcttccgagtctcagccactacagtgaatggcacagggcca
gcatctgactgggtgtctgcggaaacatttgaaagtgacctggatgaatcccgggtccca
gacaaacccagctctctacacgttcgacctttgattaataacattgttgtaagctggact
ccacctgaaaaccagaacattgttgtacgaggttacaccattggctatggcattggcagt
cctcatgcagaaactattcgtgttgactataagcaacgttattataccattgggaatctg
gagcccaactcacactatgtgatcgcacttaaagcatataacaggaatggagaaggaatt
ccactgtatgagagcacagccaccaggcctctaactgatccttttgacccttccgaagtt
tatatatttgatcttttcaataatccatacactccagtaccagaccctagtcccatgctg
cctccggtcggagttcaagctactgtccttacccacgacaccatccgggtcacctgggcc
gatagctcgctacccaagaaccaaaagatcatcgatgctcgattctacacagtacgttgg
aaaaccaactaccctgccaacactaaatacaagactgcagacaccaccacgctgagttat
atcgtctcaggattgaaaccacacacactatatgagttttctgtgaaggtaacaaagggt
cggaggtcaagtacctggagcatgacagcacatggaactacctttgaaacagtaccaaca
tcacctcccaaggatctaacagtggtgagcaaggaaggaaaacccaggaccattattgtc
aactggcaacctccatcagaggccaatggaaaaataacaggatatatcatatattacagc
acagatatcagtgcagagatccatgactgggtgattgagccggtggtgggagacagactg
acacaccagatccaagatctcactctcgatactagttatttcttcaaaatccaagcccgg
aattccaaaggcatggggcccttgtctgagttcgtccagttccgcacacccaaagctgag
tcatcagacaaaatggctaatgaccaagcacttggatcatctggaaaatttgggaaaatc
cctccaatgatggactctggttcggatacaagacactccatcagtggtcacaacagtccc
catggcagccctacctcgagcctggatagcaacatgatgctgattatcatcatctcggca
ggagtcttcacaattatcattgtggtcatcattgcattgatctgcactcgaaggactaac
taccagcagaaaaagaagcgtgcagcctgtaaatccgctaatgggtctcacaaatacaaa
gggaattcaaaggatgtgaaacccccagatctctggattcaccatgaacgcctggagctg
aaaccgattgacaagtctccagatcccaatccagttatgactgatactcccattccccgt
aattcccaggacattactccagtggagaacgccatggacaaagaccatcaacgtaggaat
tcctacctgggccgtgaacttgaagatggcatgtctacgttgagtgggcgacgaggttta
cgaccaaagatgatgatgccttttgatactcagcctcctcagcctgtgattagtgctcat
cccatccattcactcgacaaccctcatcatcatcacctttgtgacggaccttcatcccca
actcgcagctaccttcgacatcagatcagcagccggccgcttggcccatcagtagacagg
gccaattctacagaatctgtacggaatacaccaaatagcgacatgtcaccagcgccaact
tcccaggctcaccctgtggagagtatagaggctgatgttcctgcagtttcatatttgcct
ggatctcaggaggaggagtccaatcgcagtgttccaaccgcccatgtgcgtccatcccac
ccactgaaaagttttgctgtgatcaccatccctcctgtcagtaccaactatgaaacagca
tcatcgagtacacctttactgtctcagacaggaccaaacccgcaagtacactctgtgaag
acagcatctataggaaccctgggtaggagcagatcccctatggcagtaactgtacccagt
gcaccggatgttgcagaatccactaaaatgttggaagactctgatagtaattatggccca
gatgaacttacggaagagatgacacatctcacaggtttaatgaaggatctgaatgttatc
actacggcatag
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