Chiloscyllium plagiosum (whitespotted bambooshark): 122542522
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Entry
122542522 CDS
T08871
Name
(RefSeq) E3 ubiquitin-protein ligase ARIH1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122542522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122542522
Enzymes [BR:
cpla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
122542522
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
122542522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
UBA_ARI1
IBR_1
IBR_2
Ariadne
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_UBOX
zf-RING_14
Motif
Other DBs
NCBI-GeneID:
122542522
NCBI-ProteinID:
XP_043536290
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Position
40:complement(12659143..12728515)
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AA seq
528 aa
AA seq
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MDSDEGYMYDEDEYSEESEPEDNFEIGEVEMQEPGLEPGQDGDGVGGGGGGLGGLGGLGG
LGAEQEEEDYRYEVLSAEQIVQHMVECIREVNEVIENPATITRILLSHFNWDKEKLMERY
FDGNLEKLFAECHVVNPYKKSRTRQMNTRSSSQDMVCAICYLNYPNSYFTGLECGHKFCM
QCWNEYLTTKIIEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVEC
NRLLKWCPAPDCHHVIKVQYPDAKPVRCKCGRQFCFNCAENWHDPVKCKWLKKWIKKCDD
DSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNC
NRYNEDDAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEEMQQHN
MSWIEVQFLKKAVDVLCQCRATLMYTYVFAFYLRKNNQSIIFENNQADLENATEVLSGYL
ERDISQDSLQDIKQKVQDKYRYCESRRKVLLQHVHEGYEKDLWEYIED
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggactcggacgagggctacatgtacgacgaggatgagtacagcgaggagagcgagccc
gaggataacttcgagatcggtgaggtggagatgcaggagcccggcctggagcctggccag
gacggtgacggggtcggcggtggaggcggcggccttggaggtttaggcgggctgggcggc
ctgggcgccgagcaggaggaggaggattaccgctacgaggtgttgagcgccgagcagatc
gtccagcacatggtggagtgtatccgggaggtcaacgaggtcatcgagaatccagccaca
atcacaaggatacttctcagccacttcaactgggataaggagaaactaatggaaagatac
tttgatggaaacttggagaaactttttgcagaatgccatgtagtaaacccttataaaaag
tctcgaacacgtcagatgaacacaagatcatcctcacaagatatggtttgtgcaatctgc
tacctgaattatcctaactcgtacttcacaggcttagagtgtggtcacaaattctgtatg
cagtgctggaatgaatacttaactacaaagatcatagaagaaggtatggggcagactata
tcatgcccagctcacggctgtgatatcctcgtcgatgacaacacagttatgcgtttgatc
acagattccaaagtcaagttgaagtaccagcatttaataaccaacagttttgtagagtgc
aatcgactgttaaaatggtgccctgcccctgactgtcaccatgttattaaagtccagtat
cctgatgcaaaacctgttcgctgtaaatgtgggcggcagttctgcttcaactgtgctgag
aattggcatgatcctgttaaatgcaagtggttgaagaagtggattaagaagtgtgatgat
gacagtgaaacttccaattggattgcagcaaacactaaggaatgtccgaaatgccatgtg
accattgaaaaggatggtgggtgcaatcatatggtttgtcgcaatcagaattgtaaagcg
gaattctgttgggtctgccttggaccctgggagccacatggatctgcctggtataactgc
aatcgttacaatgaagatgatgcaaaggctgccagggatgcccaggagcgttctcgagca
gcactccagcggtacctattctactgcaaccgctatatgaaccacatgcagagcttgcgg
tttgagcacaaactctatgctcaggtcaagcagaagatggaggaaatgcaacaacacaat
atgtcttggattgaggtgcagttcctgaagaaagctgtggatgtgctctgtcagtgtcgc
gccacattaatgtacacttacgtctttgctttctacctcagaaagaacaaccagtccatt
atctttgagaacaatcaggcagatctggagaatgcaacagaagtgctgtctggctatctg
gagagggacatatcccaggactccctgcaagacatcaaacagaaagtacaagacaagtac
agatactgtgagagccggaggaaggtgttgctacagcatgtgcacgaaggctatgagaaa
gatctttgggagtatatcgaggactga
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