Chiloscyllium plagiosum (whitespotted bambooshark): 122542547
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Entry
122542547 CDS
T08871
Symbol
lman1
Name
(RefSeq) protein ERGIC-53
KO
K10080
lectin, mannose-binding 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122542547 (lman1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122542547 (lman1)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cpla04091
]
122542547 (lman1)
Membrane trafficking [BR:
cpla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
122542547 (lman1)
Lectins [BR:
cpla04091
]
L-type lectins
122542547 (lman1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
Golgin_A5
IMD
DUF5344
Motif
Other DBs
NCBI-GeneID:
122542547
NCBI-ProteinID:
XP_043536395
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Position
1:complement(42126402..42192810)
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AA seq
490 aa
AA seq
DB search
MAALVTVTGSLLVLAIGGAGVAAELPNRRFEYKYSFKGPHLVHGDGSIPFWIHTGNAIPS
ADQIRITPSLKSQKGSVWTKSKFSFENWEIEVTFRVTGRGRVGADGLAIWYTVDQGLDGP
VFGAADSWNGVGIFFDSFDNDGKKNNPVVLVVGNNGQYLYDHQNDGATQALGSCLRDFRN
KPYAVRARIIYYKKILTVMLHNGFTPNNDDYELCARVENMMLPPEGYFGISAATGGLADD
HDVLSFLTFRLLEPGKPVEPADLTIPQEEKEKYREEYENFQQELDKKKEEFQKDHPDMQG
EAADIFETVNERELRQIFEGQNRIHLEIKQLNKQLNMILDEQRRYVSLVTEEMAKRGTNT
APQAGQLPPGELDNIMRYQQEVLRHVGELKNSVTNALNQAAQLPGGATGSYETIQHFHEI
KENLHTVKRDLAALVQRNLNVEKPKCPELPPFPSCLSTTHFFMFVAVQTVLFIGYIMYRS
QQEAAAKKFF
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggtgacagttaccggcagcttgctcgtgctggccatcggcggggccggg
gtggccgccgagctgcccaaccgacgattcgagtacaagtacagcttcaaggggccgcac
ctggtgcacggcgacggcagtatccccttttggatacacacgggcaatgcaataccaagt
gctgatcaaatccgtataacaccatcactgaaaagtcagaagggatctgtttggacaaaa
agcaaatttagttttgaaaactgggaaattgaagttactttccgtgtgacagggagagga
cgggttggagctgatggtttggcaatctggtacacagtagatcaaggattagatggccca
gtttttggagcagctgattcatggaatggtgttggtattttttttgactcctttgacaat
gatggaaagaagaataacccagtagtacttgttgttggaaacaatgggcaatatctctat
gatcatcaaaatgatggtgcaacgcaagcattaggctcttgtctgagagactttaggaac
aagccttacgctgtaagagctagaattatctactacaaaaaaatactgacggttatgcta
cataatggctttactccgaataacgatgattatgaactttgtgccagagtagaaaatatg
atgcttccacccgaaggttattttggaatctctgcagcgactggtggtcttgcagatgat
catgacgtcttgtcctttctgacattcagacttttggaacctggcaagccagtggagcct
gctgatttgacaattccccaagaagaaaaagagaagtatcgagaggagtatgaaaatttc
caacaggaacttgataaaaagaaagaagagtttcaaaaagatcatcctgatatgcaagga
gaagcagcagatatatttgaaactgtgaatgagcgagaattgagacaaatctttgaaggt
cagaatcgcatccaccttgaaatcaaacagttgaacaaacaactcaacatgattctggat
gaacaaaggaggtatgtctccttagtgacagaggaaatggcaaagagggggactaataca
gcaccacaagcaggacagctccctccaggcgaacttgacaatattatgagataccagcaa
gaggtgcttagacatgtcggtgaattgaagaattctgtaactaatgccctgaaccaagca
gctcagcttccaggtggtgcaacaggaagctatgaaacaattcagcatttccatgaaata
aaagaaaatcttcatactgttaaaagagaccttgctgcattagtacagagaaatctaaac
gtcgaaaagcctaaatgcccagaattgcccccattcccatcatgtttgtccacaactcat
ttcttcatgtttgtggcagttcaaaccgtgttgtttattggttatatcatgtatcggagc
cagcaagaagcagccgcaaagaagttcttttga
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