Chiloscyllium plagiosum (whitespotted bambooshark): 122542619
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Entry
122542619 CDS
T08871
Symbol
roraa
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122542619 (roraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cpla03310
]
122542619 (roraa)
Transcription factors [BR:
cpla03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122542619 (roraa)
Nuclear receptors [BR:
cpla03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
122542619 (roraa)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
MIOS_a-sol
Motif
Other DBs
NCBI-GeneID:
122542619
NCBI-ProteinID:
XP_043536522
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Position
40:complement(22420585..23105949)
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AA seq
480 aa
AA seq
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METVQPAPAPATAAAASPESAGSRGGHSVPRGGGGEHGAPARRHSCSSTNRGISVTKKTH
TSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNR
CQHCRLQKCLTVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQPGEAEPLTP
TYNGLTELNNDLSNLYMDGHTPEVGKADSGMNNFYLDIQPSPDQSGLDINGIKQEPICEY
AAVPDFFPYCSFTNGESSPTVSMTELEHLAQNISKSHIETCQYLREELQQITWQDYVQEE
VEIYQNKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGCDDLINSI
FEFGKGLCMLHLVEDEIALFSAYVLISADRLWLQEKIKVEKLQQRIQLTLQHILQKHHRE
DGILTKLLSKVSTLRTLCNRHIEKLSSFKAIHPDIVRVHFPPLYKELFSSEFEQMMPTDG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgtccagccagcaccagcaccagccacagccgccgccgccagccccgagtcg
gccggctccagaggcggacacagcgttccgagaggcggcggcggtgagcacggagcgccc
gcccgccgccacagctgctccagcaccaaccgaggtatttcagtcacaaagaagacgcac
acatctcaaattgaaattatcccatgcaagatctgtggagataaatcgtcaggaatccat
tatggcgtcattacatgtgaaggctgcaagggtttcttcaggagaagccaacagagcaat
gctacctactcatgccctcgacaaaagaactgcctcatcgaccgaacaagccgcaatcga
tgccagcactgccgattacagaagtgtttgacagtgggaatgtctcgagatgctgtcaag
tttggtcggatgtccaagaagcagagagacagcctgtatgctgaggtccagaaacatcgt
ctgcagcagcaacagcgagaccaccagcagcaacctggggaagcagaacccctgactcca
acgtacaatgggctgacagaactgaacaatgacctcagcaacctttacatggatgggcac
actccagaagtgggcaaagctgactcaggaatgaacaacttctatctggacattcagcca
tccccagaccagtccggtctagacatcaatggtattaaacaggagcccatatgtgaatac
gcagcggtccctgacttttttccatactgctccttcacaaacggtgaaagctctcccact
gtctcaatgacagaactagagcacctcgcacagaacatctccaagtcccacattgagacc
tgccagtacctgcgggaagagctgcaacagataacatggcaagactacgtgcaggaagaa
gtggagatttaccagaataagccccgggaggtgatgtggcagctttgcgctatcaaaata
actgaggcgattcagtatgtggtggagtttgcgaaacggatcgatggattcatggaactg
tgtcaaaacgatcagattgtacttctgaaagcaggttgtgacgacttgatcaactccatc
tttgaattcggcaaaggtttgtgtatgttgcacctcgtggaggacgaaatcgccttgttt
tctgcctacgtgctgatctctgcagatcgtctctggctccaggagaagataaaagttgaa
aaactgcaacagagaattcaattaacgctccagcatattttgcagaaacatcacagagag
gatggcattctgacaaagctgttatctaaagtgtctacgttacgaacactgtgtaatcgg
cacattgagaagctgtcctcgttcaaagcaatacacccggacattgtgcgggtacatttc
cctccgttgtataaggagctgttcagctccgagtttgagcaaatgatgccgacggatggt
tag
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