Chiloscyllium plagiosum (whitespotted bambooshark): 122542622
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Entry
122542622 CDS
T08871
Symbol
tpm1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04260
Cardiac muscle contraction
cpla04261
Adrenergic signaling in cardiomyocytes
cpla04814
Motor proteins
cpla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122542622 (tpm1)
04820 Cytoskeleton in muscle cells
122542622 (tpm1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
122542622 (tpm1)
04261 Adrenergic signaling in cardiomyocytes
122542622 (tpm1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpla04812
]
122542622 (tpm1)
04147 Exosome [BR:
cpla04147
]
122542622 (tpm1)
Cytoskeleton proteins [BR:
cpla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
122542622 (tpm1)
Exosome [BR:
cpla04147
]
Exosomal proteins
Exosomal proteins of microglial cells
122542622 (tpm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tropomyosin
CLZ
Laminin_II
NBP1
CC_Bre1
ERM_helical
CCDC39
TMF_DNA_bd
DUF745
ATG16
DUF5930
MAD
Laminin_I
Motif
Other DBs
NCBI-GeneID:
122542622
NCBI-ProteinID:
XP_043536531
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All DBs
Position
40:24195238..24242222
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AA seq
233 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVALQKKLKGTEDELDKY
SEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRAQKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTE
ERAELSESRARQVEEEVRIMDQTLKSLAAAESKVLELIHSMALPCSLAPLCAI
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggacgccattaagaaaaagatgcagatgttaaaactggacaaggagaatgccttggac
cgagctgaacaagccgaagcggacaagaaggcagcggaggacaggagcaagcagctggag
gatgagctggtggccttacagaagaaactgaaggggactgaggatgaacttgacaaatat
tccgaagctctgaaagatgcacaggagaagttggaactggctgaaaagaaagccacagat
gctgaagcagacgtcgcctctctgaacagacgcatccagctggttgaggaggagttggac
agggcccaggaacgcctggccaccgctctgcagaagctggaggaagctgagaaggctgca
gatgagagtgaaagaggcatgaaggtcattgagaacagggcccagaaggatgaggagaag
atggaactgcaggagatccagcttaaggaagccaagcacattgcagaggaggctgaccgc
aagtatgaagaggttgcacgtaaactggtgatcattgagagtgacctggagaggactgag
gagcgggcggaactctctgaatctcgggctcgccaggtggaagaggaggttagaataatg
gaccaaaccttgaaatctttagcagcagcagaaagcaaggtactggaactaatacactct
atggccttgccttgctccctcgcaccactgtgtgctatctaa
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