Chiloscyllium plagiosum (whitespotted bambooshark): 122542633
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Entry
122542633 CDS
T08871
Symbol
neil1
Name
(RefSeq) endonuclease 8-like 1 isoform X1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122542633 (neil1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpla03400
]
122542633 (neil1)
Enzymes [BR:
cpla01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
122542633 (neil1)
DNA repair and recombination proteins [BR:
cpla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122542633 (neil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
122542633
NCBI-ProteinID:
XP_043536553
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All DBs
Position
40:complement(25335616..25379180)
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AA seq
431 aa
AA seq
DB search
MPEGPELHLAARFVNQVCCSTVFSGQVEKSTVSKNCDVPFSCDAYLISAVSRGKEVKLTL
TPIKEEDGKEGITSDGVEGDDRLLAPMDIVFRFGMSGSFKLTTEEDIPKHAHLKFFTKRK
PRQVLCFVDPRRFGSWEVNGTWQPDRGPCVMLEYERFRSNVLTNLSERAFDKPICEMLLN
QKYFSGIGNYLRAEILFRSKVPPFEKARTVLEPLLHKETSQANEVSLSKKIKIKMENPDL
LELCHMLPTEVVNLDGKGYDPEHVGESSAFEDWLRCYNVDGMQSLRDSNGRTIWFQGNPG
PMAPKGSKTPKPKSRGRKTTDGDGKKTSTSEDSESSKGRVKSEQRRTCRVPADPSRKRGR
SRKADRGQTAETVQAREGTRKKAARRGKSSEAKSPEAPAAESENLNKRPRKTRTKSRKQA
SGSLVKSESLD
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaggacccgaactccacctggctgccaggtttgttaaccaggtctgctgcagc
actgtgttctcagggcaagtagaaaagtctacggtgagcaaaaactgtgacgtgcctttc
agctgtgacgcctacctgatctccgccgtgtcgagagggaaggaggtcaagctgaccctt
acccccatcaaagaggaggatgggaaagagggtatcacatcagatggggtggaaggcgat
gacaggctgttggcgccgatggacattgtcttccgctttggcatgtctgggtccttcaag
ctgacgactgaggaggacatccccaaacacgcccacctcaagttcttcaccaaacggaag
cctaggcaggttctgtgctttgttgaccccagaaggttcggcagttgggaagtcaacggg
acctggcagccggacaggggaccgtgcgtgatgcttgaatacgagaggttcagatcaaat
gtgctgacaaacctatcagaaagagcctttgacaagccgatctgtgagatgctgttgaat
cagaaatacttcagcggtattggcaattacctgcgagcagagattctcttcaggtcaaaa
gtccccccttttgaaaaagccaggaccgtgctggaacctttgctacacaaagaaacgtct
caggcgaatgaggtgtctttgagtaagaagataaagataaagatggagaatcctgatctt
ctggaactttgtcacatgcttccgacagaggttgttaatttggatggcaagggctatgat
cccgagcatgtgggtgaatcctctgcctttgaagactggctccgttgctacaatgtcgat
ggaatgcagtcgctacgtgacagtaatggaagaaccatttggttccagggaaacccagga
cctatggcaccgaaaggatccaagactcccaagcccaaatcccggggcagaaagacaacg
gatggagatgggaagaagacatccacatctgaggactccgaatcgagcaaagggagggtg
aaatcggagcagcggagaacctgcagagtccccgcggatccttcccggaagaggggccgg
agtcgcaaggcggatagagggcagactgccgagacagtacaggctagggagggaaccagg
aaaaaggccgctcggcgtgggaagagttcggaagccaaatccccggaggctccggcagca
gaatctgaaaacctaaacaaacgaccaaggaaaactaggaccaaatcgaggaagcaggcc
tcaggctctcttgtaaaatcggaatctttggattag
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