Chiloscyllium plagiosum (whitespotted bambooshark): 122542677
Help
Entry
122542677 CDS
T08871
Name
(RefSeq) BRD4-interacting chromatin-remodeling complex-associated protein-like
KO
K25612
BRD4-interacting chromatin-remodeling complex-associated protein
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122542677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122542677
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
122542677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLTSCR1
Motif
Other DBs
NCBI-GeneID:
122542677
NCBI-ProteinID:
XP_043536590
LinkDB
All DBs
Position
41:2079013..2131554
Genome browser
AA seq
1789 aa
AA seq
DB search
MMSARAVDMDDEDGRCLLDVICDPQALNDFLHGSDQLDGDDLLDTTADPASAFFTDASLN
VQDTTVNHLNSGQTQNSSSAVDLDFLEDDILGPSPGSNLQNSDQPCDILQQSLQEANITE
QSLEEDADLDIASLHFPSLQPVSQAADASQLFSTSTDLIGLQQQPTVLAQQTLIQQQTIG
GQVVNKAINVQPFLQQVGLGNVTLQPVSNLQGLPNGSPSGALGIGQIQVVGQLSNQSVMT
INQPAQQIITKAGQPTQVTTVPVGSYISSPASDQQQVALNSAGVSPPNAGLVLQKSAPPG
ALNGNSLFAGTSIAQANQALTVRPTMSNPMTQAPLSAQNVIIQRTPTPIQPKPTGGVIQH
KLFQISSKPFASTNTALTIQNETSLQQQQQQQQQQQQQQQQKAQQNVTFMAGKPVQNVVF
SASGTGFPQTISSNVFKQHQAQQQALGKSLSLHLQGGSIVIQPQHMQQAMLQSQNQFLLQ
GQLSGASAVPLSQQLSALQANVGGQILTAQSAGGQAPATHIIASQGPAGQLIANQTLPAQ
ILTNQNIAGQLNLSQVIAAQNAHGATHILSAPIQLQPGPVGQSAVFQMPVSLANSLNPQT
SAPVQATLAGGAVNQQSQSAVVQGVTLPNQVTMLNSGESLGQSVSIQQPASNAQGSSVIQ
QQAGPGPGLMALGNGQPSLLTVQTAIASPAQPSQQQQSVQAQLASAPQSSSSSMVQTPGK
IIISQQGSAGVISQDAADMFFQQQEQKQQQLYQAALKLQQEKGLNQPSPHSLAPTATTSS
VPASVIVSSSMGLAPATPAGHADSKGQTVLPSLPNTPFQQIRAGQQMATGQQKTTLQQLP
VTSQSPLPQTPQNDGQLHLQMQSPHQMQSPHQMQSPHQSRPPSQPQPLSRPPSRPQSRPS
SQPQVLSRPPSEPLSRSCTPSQLPLQPLYVIQTQVQSSPHGAPQGQHPMRPPSQPHVQVQ
FQNPSQPEPQPQSQAQLTSPTQIHLQVQPTPQVQSQAEVQTPSHLLHPSTAPSQVPSEHH
PTQSQSQHVQLQLHCQSQAQAPLQPVYQTLHLTTEQQNRFQMVTSQLQSMSSIPNPTDQH
KHIMEKLQQMQHNIILQAKQSAANQTVSGLGPLSNQAPTMLISSQVQSPSVPAQVHTTSA
SMKSQPHGGGQAALATLLQQTSVLVKTSSAGTTTTTRSPDSKVISGGVPGGTCHIQQGAA
VPIQMKPLAQHQIQPALQTKPGVISSISGLNMNLTKGPIQIQLLGKGLTQLMPATSVPAH
QMDNKLGGSKVPVSLKPTKEAVINCTETNYTLLGCQRVFLHSLRLYISRSNLPSHASCFK
NIYLIIEICSTKCSSVSVDEEFEAVSTQLLKRTQAMLSKYRMLLFEEARRLSPSAEMVMI
DRMFIQEEKTSLTTDKQLAKEKPDEYVASSSRSHSLATSSPSPSCNTSAASLETPRAPAT
QTATQIHPTKLVIKHSGASPSVSWAKDGDDETLHTRSRPPPMKTYEARSRIGLKLKIKQE
AGLSKVVHNTALDPVHQSVSTSSVIKSTECLVATSVSQMNGTLEHATPPPAENKPPRSAN
YCKLPPRKTYRENVQSLSADRTAGTPSQGGTVREDSRRETVSKCEESSKSVIATCKSAES
PKVRTARGRPEESAVVSSLSRKARTHTHHLPPKSEEPPGGRAEDGTGGLMKELSDVEDEL
IIKADPPDGPWELALPPAKRSKSESFDMDNASFSSDSPQDDTLNEHLQSAIDSILNLRQP
QSVSVTQNPVSSPYNSSEMNSSPFSPTPHSDSYLAPNHNGGLGARTYTR
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgctcgtgcagttgacatggatgatgaagatggacgttgtctgttagacgta
atttgtgaccctcaggctctgaatgacttcttgcatggttcagaccagctcgatggcgac
gatctccttgatacgacagctgatcctgccagcgccttcttcactgatgcatctcttaat
gtacaggatacgactgttaatcatttgaacagcgggcagactcagaattcctccagcgca
gtcgatctcgatttcctggaagatgatatccttgggccatctcctggttccaacttgcag
aattctgaccagccgtgtgatatcttgcagcagagcttgcaagaggctaacatcacagag
cagtctttagaagaggatgctgatctagacattgcctcgctccatttcccttccttgcag
ccggtatcacaggcagctgatgcctcccagcttttctcaactagcactgatctgattggt
ttgcagcagcagcccacagtccttgcccagcagactctgatccagcaacagaccataggc
ggccaagttgtgaacaaggccatcaacgtacagccctttttgcagcaagtcggactcggc
aatgtgaccttgcagcccgtctcgaatctccaggggctgccaaacggaagcccgtccggg
gcattgggcatcgggcagatccaagtggttgggcagttgtcaaaccagtcagtcatgacc
atcaaccagccggcacagcagatcatcacaaaggctgggcagcctacccaggtgaccacc
gtgccggtcgggagctatatatcttcgccggcctcggaccagcagcaagtggccttgaac
tctgctggggtctcgccgcccaacgctggactcgtgctccagaagagtgcccctcctgga
gcattgaatggaaactctctctttgctggtacatccatcgctcaggcaaatcaggcgctg
acggtcaggcccaccatgagcaatcccatgacgcaggctccactctcagcccaaaacgtc
atcattcagaggaccccgactccaatccagccaaagccaacgggaggagtcatccagcac
aaactctttcagattagctcgaagccgtttgcttccaccaatactgcactgaccatccag
aatgaaacttcactgcagcagcaacagcaacagcagcagcagcagcaacagcagcaacaa
caaaaggcccaacagaatgtgactttcatggcagggaagcctgtgcagaatgtggttttc
tctgcctccgggactgggttcccccagactatctcctccaatgttttcaagcagcatcag
gcgcagcagcaagccttgggcaaatccctgagtctgcacctgcaaggtggcagcattgtc
attcagcctcagcatatgcagcaggctatgcttcagagtcagaaccagttcctcctgcaa
ggccaactgtctggtgcctcagctgtccctctttcccaacagctctctgccttgcaggca
aatgtgggcgggcagatactgactgcccagtctgctggtggtcaggcgcccgcgacccac
atcattgctagccagggtccggccggtcagctgatcgccaaccagaccttgccggctcag
atcttgaccaaccagaacatcgccggacagctgaacttgagccaggtaatagcagcccag
aatgctcacggagcaacccatatcttgtctgctcccatccagctgcagcctggccccgtg
ggtcagtctgcagtcttccagatgccagtgtctttagcgaatagtctgaaccctcagaca
tcagcacctgtccaggcaaccctggccggtggggccgtcaaccagcagagccagtcggct
gtcgtacagggagtgacactgcccaaccaggtcaccatgctgaacagtggagagagtctc
ggacagtcagtgagcatccaacagccggccagcaacgcccagggctccagcgtcatccag
cagcaagcgggacctggccctgggttaatggctcttgggaatgggcagccctcgttgctg
actgtccagactgccatagcatctccagctcagccatcgcaacagcagcaatccgtccag
gcgcagttagcctcagcccctcagtccagcagcagcagtatggtgcaaacccctgggaaa
attattatcagccagcaaggatctgcgggagtcatcagccaagatgcagctgacatgttc
ttccaacagcaggaacagaaacagcagcagctttaccaggcggctctgaaactccaacag
gaaaaaggcctgaaccagccgtcccctcacagcttagcaccgactgccaccacgagcagc
gtccctgcctcggttatcgtcagcagtagcatggggctggcaccggccacgcctgcggga
cacgcggactccaaaggacaaacagtgttgccctcgctgccgaacactccgttccagcag
atacgggctggacagcagatggccacgggacagcaaaagacaaccttgcagcagctcccg
gttacttcacagtcacctctacctcaaacgccacagaatgacggccagctccatctacag
atgcagtcgccacaccaaatgcagtctccccatcagatgcaatcaccgcaccagtcacgt
ccaccctcacagcctcagcctttgtcgagacctccctcccgccctcagtcacgtccgtcc
tctcagccccaggtgctgtccaggccaccgtcggagcccctttcccgctcttgcacgcca
tcccagctgccccttcagcctctgtatgtgattcagacccaggtccagtcatccccgcac
ggtgccccccaggggcagcacccgatgaggcctccgtcacagcctcatgtgcaggttcag
ttccagaacccctctcagcctgaaccccagccccagtctcaagcccagctgacatctccc
acccagatacaccttcaggtccagcccacccctcaggtccagagccaggccgaggtgcag
accccatcccacctcttgcacccgtccacagctccgagccaagtcccgagcgagcatcat
ccaacacagtctcagtcacagcacgtccagctccagctgcactgccagtcccaagcccag
gcccctctgcagcccgtctatcagacgctgcatctcacaacggagcagcagaaccggttc
cagatggttacgagccaacttcaatccatgtcttcgattcccaaccccaccgaccagcat
aaacacatcatggagaagctgcagcagatgcagcataacataattctacaagccaaacag
tctgcagcgaaccagactgtgagtgggcttggcccactgagcaatcaggcacccaccatg
ctaatcagtagccaggtgcagtctcccagtgtgccagctcaggtacataccacctcagcc
agtatgaaatcccagcctcatgggggaggtcaagcagccctagcaacactgcttcaacag
acatccgtccttgtgaagacatcttcagcaggtaccacgaccacaacaaggtctccagac
agcaaagtcatctcggggggagtacctggaggcacctgccacatccagcagggagcagcg
gtccctatacagatgaaacctcttgcacagcaccagattcaaccagccctgcagactaaa
cctggagtaatcagttcaatttctggtctgaatatgaacttgaccaaaggacctatccaa
atccagcttcttggtaaaggactaacacagttaatgccagcgacctctgtcccagcacat
cagatggataataaattgggaggatcgaaggtgccagtgtccctgaaaccaacaaaggaa
gctgtaattaattgtacagaaaccaactatactctgctgggatgtcagagggtattctta
cattcgttaagactttacatatctagatctaatctcccttcccatgccagttgttttaag
aatatatatttaataattgaaatctgtagcactaaatgttcctctgtttcagtggatgaa
gaatttgaggctgtatcgacgcagttattaaaacgtacccaggccatgctgagcaaatac
cgaatgctgctgttcgaggaggccaggagattgagtccatcagctgagatggtgatgatt
gacaggatgtttatccaggaagagaaaacctccctaaccaccgacaagcagctggcaaaa
gagaaacctgatgaatatgtggcatcttcctccagatcccatagcctggctacctcttct
ccatccccctcctgtaacacttcagctgcttcactggaaacccctcgggctcccgctact
caaacagccacacagatccacccgacaaagttggtcatcaagcactctggagcctcgcct
tccgtctcgtgggccaaggacggtgacgacgagactcttcacacccgaagtcggccacct
ccgatgaagacgtacgaggctcgaagcaggatcggcctgaagcttaagatcaagcaggag
gcagggctcagtaaggtggttcacaacactgcccttgaccccgtccatcagtctgtcagc
acaagctcagtcatcaaaagcaccgaatgtttggtggcaaccagtgtcagccagatgaac
gggactctcgaacacgcgacgccacccccagctgagaacaagccacctcgcagtgccaac
tattgtaagctgccaccgcgcaagacgtatcgggagaacgtgcagtcactatcagctgat
cgaactgctgggaccccatctcagggtgggactgttagggaggacagcaggagagaaact
gtgtccaagtgtgaggaatcttccaaaagtgtcatagccacttgcaaatctgcagagagt
ccaaaggtgagaactgcaagaggcagacctgaggagagcgcagtggtctcgagtctcagt
aggaaggctcgaacacatacacaccacctgcctcccaaatcggaggagcctcctggagga
agagccgaggatggcactgggggactcatgaaggaactgtcggacgttgaggacgagtta
atcatcaaagcagaccctccggacgggccctgggaactggcactcccacctgccaagcgg
agtaagtccgagtcgttcgacatggacaatgccagtttctccagtgacagccctcaggat
gacacgctcaatgagcatttgcagagtgctattgacagtatcctgaacttgaggcaaccg
cagtccgtgtcagtcactcaaaacccagtgtcgtctccgtacaattcctcagaaatgaac
tcttcgcccttttcccccactccccactcagacagctatcttgcacccaatcacaacgga
ggccttggagctagaacttacactagatga
DBGET
integrated database retrieval system
