Chiloscyllium plagiosum (whitespotted bambooshark): 122542685
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Entry
122542685 CDS
T08871
Symbol
si:ch211-11n16.2
Name
(RefSeq) zinc finger FYVE domain-containing protein 1
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122542685 (si:ch211-11n16.2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpla01009
]
122542685 (si:ch211-11n16.2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122542685 (si:ch211-11n16.2)
03029 Mitochondrial biogenesis [BR:
cpla03029
]
122542685 (si:ch211-11n16.2)
Protein phosphatases and associated proteins [BR:
cpla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122542685 (si:ch211-11n16.2)
Membrane trafficking [BR:
cpla04131
]
Autophagy
Other autophagy associated proteins
Others
122542685 (si:ch211-11n16.2)
Mitochondrial biogenesis [BR:
cpla03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
122542685 (si:ch211-11n16.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
GBP
MMR_HSR1
YfhO
Motif
Other DBs
NCBI-GeneID:
122542685
NCBI-ProteinID:
XP_043536598
LinkDB
All DBs
Position
41:4410014..4438566
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AA seq
651 aa
AA seq
DB search
MPQQDRATGTAAGSVSSLSAFFLSWWTSAKGKTFEVPDEESFVKKLGVPGDQAIKVLSIF
GNTGDGKSHTLNAAFFGGREVFRTSDTQDSCTVGVWAACEPSLDLVLLDTEGLLGATSKQ
DRRRRLLLKVLAVSDLVVYRTRAERLHNDLFRFLGNASRAYLRHFSHELQAASQRLGLGL
PMSSLGPALIVFQETSNTKLLGGDSQTPGSAEQLLQKRFHLLGLSTEAFNSVEYVGTQTT
SPPTDFSGFLEAVRQRANSTLTRCRRSPAIVYNVLKALSIRFNGEITDSRIVVDCFFPDE
YFSCSRVCLCCGAHCTNSMNHMKDNVPHQATGRCRYMHQYNNKVLICRVCYERGWEVTVN
PKTSASTDSKWFGLATYAWSGYVLECPNCGVIYRSRQYWIGNQDPEASVVRPELKHVWQG
ADSFLRPNHNGAQQVLDSVSFVIQSVSEYSAGPSKAISSWLTDQVAPDYWRPNTQITECH
QCKRPFEEGDRKHHCRACGEGCCDTCSSKSIPVPERGWGSAAVRVCDNCFRTGGKSTGKE
LGSAREGKGLLARRITEVAQSTLDTMTSAVEYPLGFVKEVARPDYWVPDHELVKCHRCAK
PFSGMTAKHHCRACGLGICGQCSPELRTVPSRGWHHPVRVCLDCSEQKGEL
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagcaagacagggctacaggaacagctgcaggatctgtttcaagtctctccgct
ttctttctctcgtggtggacatcagccaaaggaaagacatttgaggtgccggatgaggag
agttttgtgaagaaactgggagtgccgggagaccaagccatcaaggtcctctccatcttc
ggcaacacgggggacgggaagtctcacaccttgaatgccgccttcttcggcggccgggag
gtgttccgcacctcggacacccaggactcgtgcacggtgggcgtgtgggcggcctgtgaa
ccatcgctggacctggtcctgctggacaccgagggcctgctgggagccaccagtaaacag
gaccgccggaggcggctgctgctgaaggtgctggccgtctctgacctggtagtgtacagg
acgcgggctgagcggctgcacaacgacctcttccgtttcctgggcaacgcctcccgggcc
tacctccgccacttcagccacgagctgcaggccgcaagccagcgcctcgggctcggactg
ccgatgtccagtctcggacccgccctcatcgtcttccaggagacctccaacaccaagctg
ctgggtggcgactcccagactccagggagtgcagagcagctgctgcagaagaggttccac
ctgctcggtttgagcacagaagctttcaactctgtcgagtatgttggcacgcagacaacg
agcccccccaccgatttctctgggttcctggaggcagtgcgtcagagagcaaacagcacc
ttgacccgctgtcggagatcacccgccattgtctacaatgtgttaaaggctctgagtatc
agattcaacggtgagattacagatagcaggattgtggttgactgtttcttccctgatgag
tacttcagctgctccagagtgtgcctctgctgtggggctcactgtaccaacagcatgaac
cacatgaaggacaatgtcccacaccaggcaacggggagatgtcgatacatgcaccagtac
aataacaaggtgttaatctgcagggtgtgttacgaacgaggctgggaagtaactgtcaac
cccaaaacctccgcatcaacggacagcaagtggttcggactcgcgacctatgcctggtca
gggtatgttctggaatgtccaaactgtggggtaatctaccggagcagacagtactggatt
ggaaaccaagatcccgaggcatcagttgtacgtcctgaactgaaacacgtctggcaaggg
gcggactcgttcctgaggccgaaccacaatggggcgcagcaagtgctggacagtgtcagc
tttgtgatccagtcggtctccgagtacagcgcaggaccaagcaaagccatcagctcctgg
ctgaccgatcaggtggccccggattactggaggcctaatacccagatcacggagtgccat
cagtgcaagagacctttcgaggagggggaccgtaagcatcactgccgtgcgtgtggagag
ggttgctgtgacacctgctccagtaaaagtataccagtcccggaacgaggctgggggtcc
gctgcagtgagagtgtgtgacaattgcttcagaacaggggggaaaagcacaggaaaggag
ctggggtcagcgagagaaggcaaagggttattggctcgcaggattacagaggtggctcag
agcactctagatacgatgacttcagcagtcgaatatccgcttgggtttgtcaaggaagtg
gcaaggcctgattattgggtgccagatcacgagctggtcaagtgccaccgctgcgcgaag
cccttttcaggcatgacggccaagcaccactgccgagcctgcggcctaggcatctgtggt
cagtgctccccggagttgaggactgtgccatctcggggttggcaccacccagtcagggtc
tgtctggactgtagcgagcagaaaggggagctctga
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