Chiloscyllium plagiosum (whitespotted bambooshark): 122542726
Help
Entry
122542726 CDS
T08871
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein
KO
K16356
leucine-rich repeat and fibronectin type-III domain-containing protein 3
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cpla04990
]
122542726
Domain-containing proteins not elsewhere classified [BR:
cpla04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
122542726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_5
LRR_1
ig
Ig_2
fn3
LRR_9
Sp38
Ig_DSCAM-DSCAML_C
V-set
T_cell_tran_alt
Motif
Other DBs
NCBI-GeneID:
122542726
NCBI-ProteinID:
XP_043536637
LinkDB
All DBs
Position
41:389778..570589
Genome browser
AA seq
677 aa
AA seq
DB search
MERLLFSLLLLSLTVKAQLCPKRCICQNLSPSLSILCAKTGLLFVPPFIDRRTVELRLTD
NFITTVKRKDFANMTSLVHLTLSRNTISQIMPHTFGDLRGLRALHLDSNRLTRVNPEHFN
GLINLRHLILSNNQLHYIAADSFDDFIVSLEDLDLSYNNLENLPWETIGKMTNVNSLSLD
HNLIDFVPEGTFSNLHKLARLDMTSNKLHKLPPDPLFLRVQMFARTKGSPLTSLVLSFGG
NPLHCNCELLWLRRLTREDDLETCASPPHLMGKYFWFIPEEEFTCDPPLITRHTSKTFVM
EGQRAMLKCKAVGDPDPFIHWTSPDGRLISNSSRAITYENGTLHIIIATPKDSGTFTCIA
SNAGGEAMAQVELIVNPLPHFANGTNNIKEPDPGSSDITTSAKSGSPPVTNDTKATQDKK
VIATDLTSSSVQIRWPSQRNIPGIRMYQVQYNSSSDDVLVYRMIPSSSKTFLVKDLVAGR
DYDLCVLAVYDDGITTLTATRAVGCVQFTTEKEYTQCRSMHTQFLGGTMIIIIGGIIVAS
VLVFIIILMIRYKVYNNTGEHKTKVSNVYSQTNGSQNGAMPPSTSKLLESREEHVQEMLP
DAPKGTLAVALTTDYDKASVTQSPSFPTEDITPHKRRRTRTDVPFSSKEIQGEDQERQVK
QTAEHTMEPVERTDVKL
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctcctcttctcactgctcctgctcagtttgactgtcaaggctcagctttgt
ccaaagcgttgcatctgccagaacctctccccttccctctccatcctctgtgccaaaact
gggcttctctttgtgcctccatttatcgacaggaggacggtggagctgcgcctaaccgat
aacttcatcaccacggtgaagaggaaagactttgccaacatgaccagccttgtccacctc
acgttgtcgaggaatacaatcagccagatcatgcctcacacctttggtgacctccgcggt
cttcgggctctacacctggacagtaacagactgaccagagtcaaccctgagcacttcaat
ggcctaatcaatctccgacacctgatccttagcaacaaccagctgcattacatcgcagct
gactcatttgatgactttatcgtatctctcgaagatctggacctctcctacaacaacctg
gagaatctgccttgggaaactattggcaaaatgacaaacgtcaactccctcagtctggac
cataacctcattgactttgttcccgaagggacattttcaaaccttcataaattggctcga
ttagatatgacatccaacaaactgcacaagttacctcctgatcccctctttctaagagtt
caaatgtttgcaaggacaaaaggctctccgctcacctctctggtgcttagttttggtggg
aatccgttgcattgtaactgtgagctactctggttgagacgccttacaagggaggacgat
ctggaaacatgtgcctcaccgcctcatttaatgggtaaatatttctggttcatccctgag
gaggaatttacctgtgatcctccactcattacacgacatacctccaaaacatttgtcatg
gaaggtcagcgagctatgttgaaatgtaaagcagtgggggacccagacccattcatccac
tggacctcaccagatggaaggctgatctcaaattcatccagggccatcacctatgagaac
ggaaccctgcatatcataattgccaccccaaaagacagcgggacctttacttgcattgcc
tccaatgctggtggcgaagccatggcccaagtggagttgattgtcaatcctcttccacat
tttgccaacggcacaaataacatcaaggaaccagatcccggttcatcggacatcaccacg
tctgccaagtcaggttctccgccagttactaatgacacaaaagctacgcaggacaagaag
gtcattgcaactgacctcacatcgtcctccgtacagattcgatggccctcacagcgaaat
attcctggaatccgaatgtaccaagtccagtataacagctcatctgacgatgtactcgtt
tacagaatgattccatcttctagcaagacgttccttgtgaaagacttagttgctggacga
gactatgacctatgtgttctggctgtctatgatgatggaattaccactttgactgcgaca
cgggctgtaggctgtgtacagttcaccacagagaaggaatacacacagtgtcgatccatg
cacacccagttccttggtgggaccatgatcatcatcattggtggcatcattgtggcctct
gtgttggttttcatcatcatccttatgatcagatacaaagtctacaataacactggggaa
cacaagactaaggtcagtaacgtttactcacagactaatggaagtcagaatggggccatg
ccaccatcaacctcaaaactgttggaaagtcgagaggaacatgtccaggagatgttgcca
gatgctcccaaaggaaccttggccgtggctttgactacagattacgataaagcctctgtc
actcaaagcccatcttttcccacagaggatataactcctcataagcgaaggagaactcgg
acagatgtgccattctcttctaaggagattcaaggcgaggaccaagaacgccaggtcaag
cagactgcagaacacacaatggaaccagtggaacggaccgatgttaaactttga
DBGET
integrated database retrieval system
