Chiloscyllium plagiosum (whitespotted bambooshark): 122542730
Help
Entry
122542730 CDS
T08871
Name
(RefSeq) protein Smaug homolog 1
KO
K27396
protein Smaug
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122542730
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
122542730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAT_SMAUG
SAM_1
PHAT
Vts1
SAM_2
SAM_3
Motif
Other DBs
NCBI-GeneID:
122542730
NCBI-ProteinID:
XP_043536646
LinkDB
All DBs
Position
41:1772080..1863415
Genome browser
AA seq
709 aa
AA seq
DB search
MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSRTQARFLQICLEHSLADCTDIHILEG
EANDAAFISQWHQDPKEKVVLQLLSHLPLLQPGNVEAKSEYMKLLQKVLAYSIDSNLFIE
ESRQLLSYALIHPATSLDDRSSLALWLTHLEERISTNYSSQNVSPADSIYTGVYNQNQRQ
NVEDKLNEWQSRADSGMCITVPAWQDKPMTCENGHLPLHTSASVPSAINNIGSNASTVLQ
GQTQTNHSPLKRSVSLTPPINMTNQSAVSEWMSPDDLRTRAVYAPSDHAPLSPQSSIASS
GSGGSEQTEEQGSNRNTFQEEGSGMKDVPTWLKSLRLHKYASLFSQLTYEEMMTLTEHQL
ESQNVTKGARHKIALSIQKLRERQGVLKSLEKDILEGGNLRNALQELQQIIITPIKAYTT
PQMTPKEGHETDPNNSCNTIPGLGTDSRTTKAAAEKDSTSDGFQTQGVSTCDGESAVAPV
SEGDIPGQFTRVMGKVCTQLLVSRPDEENISSYLQLLEKCLAHEAFTETQKKRLFSWKQQ
VFKLLRSFPRKALLEMPGVRQRSWGFSQSSSLPTAGSVVGGLGRRGQRPFQVPPRGLSAN
RMGLIGTSAASLGGVSPRHTLNPLTSQGRQNLWFANPGGSNSMPSQSRSSVQRTYSLPVH
TSPQAILMFQQPECQVPVTEPEINTRLESLCLSMTEHALGDGVDKTSTI
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgggatcaagttggtgtgctagctgggtggtttaaaggatggaatgaatgt
gagcagacagtagccctgttatctctgttgaagagggtcagtcggacccaggctcgcttt
cttcagatctgcttggagcattcgctggccgactgcactgacatccacatactagaaggt
gaagccaatgatgctgctttcatcagccaatggcatcaggatccaaaggaaaaggttgtt
ctacaattgctttcccatcttcctttacttcagcctgggaatgtggaggcaaagtcggaa
tatatgaaactgctccaaaaggtgttggcctattccatcgatagcaatctcttcatcgaa
gagagtagacagctgttatcctatgcactaatccatcctgccacatcactggatgaccgg
agttctctagccttatggctaacccacttggaggaacgcatttcaaccaactacagttcg
caaaatgtgagcccagcagactctatttacacaggagtgtacaaccaaaatcaaaggcag
aatgttgaagacaagctaaatgaatggcagagtcgagcagacagtggcatgtgcataact
gtccctgcttggcaggacaagccaatgacttgtgagaatggacatttgcctctgcataca
tctgcatcggtgccatctgctatcaacaacattggaagcaatgcaagtacagttctccaa
ggccaaactcaaaccaaccacagtcctctcaagcgctcagtttccctcaccccaccaatc
aatatgacaaaccagtctgcagtcagcgagtggatgtctccagatgacttacgtaccaga
gcagtctacgccccatcagaccatgcacctctctccccacagagcagcatagcctcttct
gggagtggtggcagtgagcagactgaggaacaagggtcaaatcgcaatacatttcaggag
gaggggagtggcatgaaagacgtgcccacttggttaaaaagtcttcggcttcacaagtat
gcatccctcttctctcagctaacctatgaggagatgatgaccctgaccgaacaccagcta
gaatctcagaatgtcacaaagggagcacggcataaaatagccttgagcattcagaagtta
cgtgagcgacagggtgtactgaaatccttagaaaaggacattctcgagggaggaaatctt
cgcaatgctcttcaggagctgcagcagataattataacaccaatcaaggcttatacaaca
cctcaaatgacccccaaagagggtcatgagacagaccccaataactcctgcaatactata
cctggactgggcacagacagtcgaacaaccaaagcagctgccgagaaggattctacgtct
gatggctttcagacccagggtgtgtcaacgtgcgatggagagtcagccgtagctcctgta
tctgaaggtgatattcctggacagttcaccagagtcatgggaaaagtttgcactcagctg
ctggtgtccagaccagatgaagaaaatataagctcgtacttgcagctcctagagaagtgc
ctggctcatgaggcttttactgaaacacagaagaaaagactattctcatggaagcagcaa
gtgtttaagctgctgaggtcttttcctaggaaggccttgctagaaatgccaggcgttcgc
cagagaagctggggtttcagtcagtcgagttcacttcccacagccggctctgtggttggc
ggactaggcaggcgaggccaacggccattccaggtgcctccacggggtctttctgcaaac
cgcatgggtctgattggcacttcagctgctagtctgggtggtgtttctccaaggcatacg
cttaatccattgacaagtcaagggaggcagaacctatggtttgcgaacccaggtggcagt
aatagcatgccaagtcaaagtcgcagttctgtgcaacggacatactcactacctgtgcat
acctccccacaggccatcctgatgttccagcagccagaatgccaagtgccagtaacagaa
cctgagattaataccagactagaatctctgtgtctcagtatgaccgagcacgccttagga
gatggagtggacaagacatcaactatttag
DBGET
integrated database retrieval system
