Chiloscyllium plagiosum (whitespotted bambooshark): 122542734
Help
Entry
122542734 CDS
T08871
Name
(RefSeq) zinc finger protein 541-like isoform X1
KO
K26584
zinc finger protein 541
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122542734
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
122542734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ELM2
zf-C2H2
zf-C2H2_6
zf-C2H2_4
Myb_DNA-binding
zf-H2C2_2
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
122542734
NCBI-ProteinID:
XP_043536656
LinkDB
All DBs
Position
41:complement(1934014..1993953)
Genome browser
AA seq
1441 aa
AA seq
DB search
MDCYSFTDESSLQTEMHLPLLSDSELPIASNIQRQEFIPDPDDIIYAGMTSIELDYNLET
AEIPGDPFADNVDLSLYTVDKGCDSPKIPSDSTDTDSPPVLLGISPVPQKNSPEKSGGKS
EGKYGGLQKRRRLSTRHSPQQAFQECSQCGKSFSSASALSKHYLTHSHERRHVCRICNKA
FKRQDHLSGHLLTHQKNKPYVCMEHGCDKSYCDSRSLRRHYEVQHGLYCQREPFADNSSK
EVDSTEGVLYPQTGQTQTLQCEVGVAQRPTTQVESLSQRSCLPNRDMLRPLTSSVSQKIP
CETGATGSKITLHYPTQTHATASVLTSPNICLSERSSTVRQAKFGIMQREHSSSGLNCNI
TDPYSRVNPSHFSVADPSVSCVENLDSYLLDSMIPGRPSQPAQYTLESSRPASWPQDVNT
NHTLSRTETGSTRQQPSQDLVWTNNLATYSGSKGSYSYIVPNSQPPEEVSATFSSGALHK
LDSFAQAFTRQNLDIQSNSSVAKNQSENSSMSEFDACGNVFRQLLSYKTNLNQWQAYPEQ
KREILQEQYSLHQQHQQQIATSLFTQVYMGDQEASPMQNQDQFQNHMLHLISDTQYNLSQ
SQNSVSQSQVLVTQSQHVLAQKIPSQIQNNGTQSHHPSELLQDFQHSLRQETTSPFLQFQ
ATKQCQLSKNILSCYPQETECTDQQTETGLQPVSRGISECHKKSKKSPFKGQCPPQSMCE
EVVVQNQLQSQSEQLEGWSLPPCSNKRGRISNKDVCVKHYNIAGKSSKSVSISRKERQKL
DPNCTAPPSQVAMNSFPVQNSLTRSMEDCLQKPSFYANVQDEDIYSLSSIPQEADGSSTV
LCRDLVSSSTSHNLDENEENFRCERCQGVFHFLKGLNCHTCPQEGMGKQLSLEDGVKAQK
VTDNGIEKMEHGGLFFQYLEDKLSALLLKKPLEENVAVPLVIPVSVPVKSKKDGTSVKSE
TSPVTPRKSVTTKLTDLLVSSNDSSAQVTETGKQANVNCRGNSKKQRKKRSRPDPLFIPS
PASNQTGVLPGMVLYQSHMRSPVCLADHLLEKNFQPPPYTPPPMLSPIRHGSGLYFNRIC
SLSGSKASHNTYPPKGILASVVDGVDGICGISVVKDDSIVTIEPHINIGTRFQAEIPLLQ
DKSLLDDSVHQADLVWKPWDDIETNKITQMRVTDLLNLACSSVLPGGGTNLELALHCLHD
TRGDILAALDMLLMKGVRRDPCHPLGDYHYTGTEKWTTAEKRLFNRAICLNNKDFFLMQK
MIKHKTVAQCVEYYYTWKKQLKFEWKRTHLLEEDEIKPETESPADGKEIKKLVRNAAIYA
QSFSESTSIPSQTSVSREKLKKKIVRAKPNPSPSVHCQTGVQDKNEKKFTVGNFPCKECT
KVFDKVKSRNAHMKCHRQQEEQERQAEMKRSRIRVKAEPKEEPEETVLVFTSNNMSNITT
S
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atggattgctacagtttcaccgatgaaagctctctccaaaccgaaatgcatctgcctttg
ctatcagacagtgagttgcccattgcaagtaatatccagagacaagaattcatcccagac
cctgatgatattatttatgcaggaatgacaagtatagaacttgattataacctggagact
gcagaaattcctggcgatccatttgctgacaatgtagatctatccctctatactgtagat
aagggatgtgactccccaaagattcccagtgactccacggacacagattctccacccgtg
ttgctaggtattagtcctgtacctcaaaaaaatagccctgagaaaagtggaggtaaaagt
gaagggaaatatggagggctgcagaagagaaggcgtctctccacacggcattctccgcag
caagcattccaggaatgtagccaatgcggaaagtcattcagcagtgccagtgccctgagc
aaacactacctgacgcatagtcatgaacgtcggcatgtctgcaggatctgcaataaggcc
tttaagagacaggaccacttatctgggcatttgttaacacaccaaaaaaataaaccttat
gtttgtatggaacacggatgcgacaagagctattgtgactcccggtctttgcgacgtcac
tatgaggttcagcatggcttgtattgtcagagggagccttttgctgacaacagctcgaaa
gaagtggactcaacagagggtgtgctgtacccccagactggccaaactcagacccttcag
tgtgaagtgggagtggcacagaggccgacaacacaggttgagtctctttctcaaagatct
tgtctgcctaaccgagacatgctgaggcccctaacgagcagtgtaagccaaaaaatacct
tgtgaaactggtgctactggaagcaaaattacattgcactatcccacacaaacccatgct
acagcaagtgtgcttactagtccaaatatttgtttgtcagagaggtcaagcactgttaga
caagccaaatttggcataatgcaaagagagcattcttcttctggtttaaactgtaacata
actgatccatacagcagagtaaacccttctcacttttctgtagcagatcccagtgtctcc
tgtgtagaaaatctagattcttatcttttggattcaatgattcctggtagaccttcgcag
cctgcacaatatactttggaatcatcaagaccagcaagttggcctcaagatgtgaacaca
aatcatacattatcaagaactgaaactggatccaccagacaacaaccgagtcaagatctt
gtgtggaccaataacttggcaacttacagtggcagcaaaggaagttattcttatattgtc
cccaattcccagcctcctgaagaagtttctgccactttttcaagtggtgctttgcataag
ctggactcatttgcccaagcctttacaaggcagaatttggatattcagtcaaattcctct
gttgcgaagaatcagagtgaaaactcatcaatgtctgaatttgatgcttgtggaaatgtc
ttcagacaacttttgagttacaaaactaatttgaatcagtggcaagcctatcctgaacag
aaacgtgaaatactgcaggagcagtactctctgcaccagcaacatcaacagcagatagca
acttcactgtttacgcaagtctacatgggagatcaggaggcctccccgatgcaaaaccaa
gatcaatttcaaaaccatatgctccacctgatttctgatacccagtacaatctgtctcaa
tcccaaaattcggtaagccagtcacaagtgctagttacccagtcccagcatgtacttgcc
cagaaaattccatcccagatccagaataatggaacccaatctcatcatccctcagaacta
ttacaagacttccagcattccttgagacaggaaaccacttctccatttttacagtttcaa
gcaacaaaacagtgccaactctccaagaatattctctcttgctatccacaagagacagaa
tgtacagaccagcagacagagactggtttacagcctgtgtcaaggggaatctcagaatgt
cacaagaaatccaagaagagtccattcaaaggacaatgtcctcctcagtcaatgtgtgaa
gaagttgttgttcagaatcagcttcagtcacagtcagagcagttggaaggttggtcactt
ccaccctgtagcaacaaaagaggcagaatctctaataaagatgtgtgtgtgaagcattac
aatattgcaggtaaatccagtaagagtgtttcaatttctcgaaaggaacgacagaaatta
gatcccaattgcactgctcctcctagtcaggtggctatgaactcctttcctgttcagaat
tctttgacgaggagtatggaagactgtcttcagaaaccatctttttatgctaatgtacag
gatgaagatatttacagtctttccagcataccacaagaggcagatggatcatcaacagtg
ctgtgcagggacttggtgagtagcagcacttcccataatttggatgaaaatgaagaaaac
ttcaggtgtgaaaggtgtcaaggtgttttccattttctaaaaggactaaactgtcacact
tgtccacaagaaggaatgggaaaacagctttcattggaagatggtgttaaggcacaaaag
gtgactgataatggaattgagaaaatggaacatggtggattgttctttcagtatctggag
gataaactcagtgctcttctgctaaagaagccacttgaggaaaatgtggcagtgccgtta
gtgattccagtgtcagtgcctgtaaaatccaagaaagatggcacatctgttaaatctgaa
acttcaccagttacaccaaggaagtcagtcacaacaaaattgactgatctattagtatct
tcaaatgacagctctgcccaggtcactgaaacaggcaaacaagcaaatgtaaattgtaga
ggcaattccaaaaagcaacgtaagaagcgatctcgtccagaccctctctttatcccatca
ccggcatcaaatcagactggggtgctgccagggatggtactgtatcagagccatatgcgt
tcccctgtttgtttagcagatcaccttctagagaaaaactttcaacctccgccatacaca
cctcccccgatgttgagtcccatccgtcatggctcaggactttacttcaacaggatctgt
tctttgtctgggagtaaggcatcacacaatacataccctcctaaaggaattctggccagt
gttgtagatggtgtagatggaatttgtggtatctctgtggttaaagatgactctatagtc
accatagaaccgcatattaacattggaacacggttccaggcagagattccgttattgcaa
gacaagtcattacttgatgatagcgttcaccaagcagatctagtatggaaaccatgggat
gacattgaaactaataaaatcactcagatgagagtgacagatctgttgaatttagcttgt
tcgagtgtgctgcctggaggaggtaccaatttggaattagctctgcattgtctacacgac
acccggggagatattttggctgccctggatatgttactaatgaaaggtgtaaggcgagac
ccttgtcaccccttgggagattaccactacactggtactgagaagtggactacggcagag
aaaaggttgttcaatagggcaatttgccttaacaacaaggatttcttcctgatgcagaag
atgataaaacacaagaccgtggcacagtgtgttgaatattactacacctggaagaaacag
ctaaagtttgagtggaagcgaacacacttgcttgaggaagacgagataaagcctgagaca
gagagtcccgctgatggaaaagaaataaaaaagctggttagaaatgctgctatttatgct
cagtcattctcagagagtacaagcattccttcccagacaagcgtgagcagagaaaaacta
aagaagaaaattgtacgggctaagcctaacccttctccatcagttcactgtcagacagga
gtccaagacaagaatgagaaaaagtttactgtgggaaatttcccatgtaaagaatgcaca
aaagtatttgacaaagtgaaaagtcgaaatgctcacatgaaatgtcataggcagcaggag
gagcaagaaaggcaggcagagatgaaacgatcgaggatacgtgtgaaagctgagccaaag
gaggaaccagaggagacagtcttggtcttcacctccaacaatatgtcaaacattaccaca
tcataa
DBGET
integrated database retrieval system
