Chiloscyllium plagiosum (whitespotted bambooshark): 122542757
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Entry
122542757 CDS
T08871
Name
(RefSeq) serine/arginine-rich splicing factor 5-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03040
Spliceosome
cpla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122542757
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122542757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpla03041
]
122542757
Spliceosome [BR:
cpla03041
]
Common components
Common spliceosomal components
SR proteins
122542757
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
SET_assoc
Nup35_RRM_2
RSRP
Motif
Other DBs
NCBI-GeneID:
122542757
NCBI-ProteinID:
XP_043536696
LinkDB
All DBs
Position
41:complement(3804063..3821514)
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AA seq
284 aa
AA seq
DB search
MNGCRVFIGRLSPQVRERDVEKFFKGYGRIREIDLKRGFGFVEFDDARDADDAVYELNGK
ELFRERITVELAKAPPRRGGGRFGGRFNYYRPRSERSSGLRYGPPVRTDYRLIVKNLSSR
VSWQDLKDIMRQAGEVTFTDAHRVHNNEGIVEFASYSDLKNAIDKLDGKEISGRRVQLIE
EPRRHRSWTRSRSRSSSRSRSYKGSRSASRSASRSPSRSRSRSRSRSPARDSKRQRNESR
SLSRSPEVKRRRKPTQSRSRSNSPVKSTRSWSGSREQSPVNSAE
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaacggttgccgtgtgtttattggtcgcctgagtcctcaggtgagagaacgtgatgtg
gaaaagttcttcaaaggttatggacgtatccgtgaaattgacctgaagagaggctttggg
tttgtggaatttgatgatgcccgggatgctgatgatgcagtttatgagctgaatgggaag
gaactgttccgggagaggatcactgtggagcttgcaaaagcaccacctcggagaggaggg
ggcaggtttggtggaaggtttaactattaccgccccagaagtgagcgaagcagtggacta
agatatggacctcctgttcgtacggactaccgtttgattgtgaagaatctatcttcccgt
gttagctggcaggatctgaaggacatcatgcgccaggctggtgaagtgaccttcactgat
gctcacagagtccataataatgaaggtattgtggagttcgcctcttacagtgatttgaaa
aatgcaattgataaactggatggaaaagaaatcagtggccggagggtccaattgattgag
gagccaagacgccacaggtcttggacacgatcccgctctagaagctcttcaagatcccgc
agctataagggctctagaagcgcttcaagatctgcaagccgctccccaagccgtagcagg
tctcgttcccggagcaggtcgcccgctcgtgatagcaagcggcagaggaatgaatcgcgc
tcactgagccgttcgcctgaggtcaaacgtcgtaggaaaccaacccagtcgaggtcgcga
tcaaattctcctgttaaatcgacccgttcctggtctggttctcgggagcagtcccctgtc
aacagtgcagagtaa
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