Chiloscyllium plagiosum (whitespotted bambooshark): 122542783
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Entry
122542783 CDS
T08871
Name
(RefSeq) transcription factor RelB homolog isoform X1
KO
K09253
transcription factor RelB
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04010
MAPK signaling pathway
cpla04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122542783
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
122542783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122542783
Transcription factors [BR:
cpla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
122542783
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
122542783
NCBI-ProteinID:
XP_043536758
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Position
41:complement(5580667..5643331)
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AA seq
699 aa
AA seq
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MRGNEQQHTPTEAAMRGKEEQSQQQLSLGLSGPPGATGSIQQDQNFDLNVLNEFILKDLE
EGQNRNSVPCDFTNPHIGEIRNQLMNHIPGWAASPVELMPMDTCSPQLVSRGAGSPQLVK
RGAGSPQLVSRGTGSPQLVSRGTGSPQLVSRGTGPPQLVSRGTGSPQLVRKDNQAQDTKR
KMPYRGGRRVDPPSSRASSRHFGLPLSGVFVKEEMPKLVIVEQPKQRGMRFRYECEGRSA
GSIPGENTTEQTKTLPTIQIQNWQGEVKVIISLVTKDEPYKPHPHSLVGKDCQNGICEVT
VSPKCNMKASFANLGIQCMKKKEIGKALEHRLKLGIDPFNVGDSARCSEDVDMNVVRLCF
QAFIQETNLALAPVLSDPIYDKKATNTSELRICRLNKDNGVCTGGEELFLLCDKVQKEDI
AVVFSRGNWEAKGVFSQTDVHRQIAIVFKTPPYCDIDIQEPVTVRLQLYRPSDKEYSESF
EFRYLPKLNDAYGVRSKCTRKIKFPSINTLMGSNLASSEPVTRLKNQASSFTQPDPPAIQ
MKQTIKNRDFQFPANMDVGYNFQHEEDQLYLNPVTKPWNCYTQEDYATAVPYTDNSLEDL
QDDPYSQCYMKDEPLDTTNYGFYSQLEELRKCREPEGVGATFDTNYNVLPPVEDLPMAPA
DGDLDNYMLNMDFANGSEELSTILGSSIAMPNEQPGSKG
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgaggggtaacgagcagcagcacaccccgacagaggcagcaatgagaggcaaggaggag
caatcgcagcagcaactctccttgggcctttcaggtcctccaggtgccacaggatcaata
cagcaggaccagaatttcgatctgaacgtgttgaatgaatttattttgaaagatcttgaa
gaagggcaaaacaggaactccgtgccttgtgatttcaccaacccccacatcggagagatc
aggaaccaactcatgaaccacatcccaggatgggcagcctcaccagtggagctgatgcca
atggacacgtgctcccctcagctggtcagcaggggcgcagggtcccctcagctggtcaag
aggggtgcagggtcccctcagctggtcagcaggggcacgggctcccctcagctggtcagc
aggggcacaggttcccctcagctggtcagcaggggcacagggccccctcagctggtcagc
aggggcacgggctcccctcagctggtcaggaaggacaaccaggcgcaggacacgaagcgg
aagatgccgtaccgaggggggaggcgggtggacccgccctcgtcccgcgcgagctccagg
cactttggcctcccgttgtccggggttttcgtgaaggaggagatgccaaagctggtcatc
gtggagcagcccaagcagcgggggatgaggtttcgctacgagtgtgagggccgttcggcg
ggaagcatccccggagagaacacaacggagcaaaccaagactctcccgaccatccagatc
cagaattggcaaggcgaggtcaaggtgatcatttccttggtgaccaaagatgaaccatac
aagccgcacccccatagtcttgtggggaaagactgtcaaaacggcatctgtgaagtaact
gtcagtcccaagtgcaacatgaaagccagttttgccaatctgggtattcagtgcatgaag
aagaaagaaattgggaaagccctggaacaccgactgaaacttgggatcgatcctttcaat
gttggtgactctgcgaggtgttcggaagacgttgatatgaatgtggttcgactttgcttc
caggcctttatccaagagacgaacttggccctagcccctgtcctgtcggatccaatctat
gacaaaaaggcgactaacacttcggagctgcgaatctgtcgcctgaacaaggacaatggg
gtttgcacaggaggggaggagctgtttctcctgtgtgacaaggtgcagaaagaagatatt
gccgtcgtcttctcaagaggcaactgggaagcaaagggagtcttctcccaaaccgatgtt
caccgtcagatcgccatagtcttcaaaacgccgccgtattgtgacatcgacatccaggaa
cccgtcaccgtgaggctgcagttgtaccgcccctctgataaggaatacagcgagtccttt
gagttccgttacctcccaaaactaaatgatgcctatggagttcggagcaaatgcacgaga
aagatcaaattcccttcaatcaacaccttaatgggatccaatttagcttcatcagaacca
gtaacacggttaaagaatcaagcttccagttttactcagccggacccaccagctatccag
atgaaacagaccatcaagaatcgagatttccaattcccggctaacatggacgttggttat
aattttcaacatgaggaggatcagctctatttgaatccggtgaccaaaccctggaactgc
tacacccaggaagattatgcgactgctgtgccctacactgacaattccctggaagatttg
caggatgacccatacagtcaatgttacatgaaagacgagcctttggacacgactaattat
ggattttacagccaattggaggagctgcggaagtgccgggaacccgagggcgtgggtgcc
acctttgacacgaattacaacgtcttgccacctgttgaagacctccccatggctccagca
gacggggacctcgacaattacatgctgaacatggattttgccaatggcagtgaggaactg
tccaccatcttgggcagcagtattgccatgcccaatgagcagccaggatccaaaggctga
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