Chiloscyllium plagiosum (whitespotted bambooshark): 122542817
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Entry
122542817 CDS
T08871
Name
(RefSeq) neuronal PAS domain-containing protein 3-like isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122542817
Transcription factors [BR:
cpla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
122542817
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
122542817
NCBI-ProteinID:
XP_043536819
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All DBs
Position
41:8342070..8775673
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AA seq
909 aa
AA seq
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MLKMATQYNNELKCVSVEWDFLQGLLVKNQPVPCLQALRKEKSRNAARFRRGKENFEFYE
LAKMLPLPGAITSQLDKASIIRLTISYLRMRDFANLGDPPWNLRIEGPPPNISVKAIGSQ
QRRSSTSLAIELFEQHLGGHILQSLDGFIFALNREGKFLYISETVSIYLGLSQVELTGSS
IFDYIHPGDHVEVAEQLGLKLPSGRGHSSQTSNEDGASSTSSSSLAETPESGKADSGSPS
LLGDDNVLERTFFIRMKSTLTKRGVHVKSSGYKVIHVTGRLRSRISLPHARAVPTSFMGM
VALAHTLPPSTINEVRIECHMFVSRVSLDLQIIYCENRISDYMDLSTTDVVGKNCYHFIH
AEDVEGIRHSHLDLLNKGQVVTKYYRWMQKNGGYMWVQSSATISINVKNGNEKNIIWVNH
VLSKPEHRNTPMDISQLPLSAIKSSKQLELSDSESDSREHLERDNPKDTGKRSNYEKLAA
PRSEGWKRSVSQSEEELTSAKDDSDSSLPDDSDSEGPSTGRRSFVLSKVKRMKVEGDGEV
RPVVREPRSSLPSGGDGDTDSSEDESSGLASKPQYLKRKRRPRESSAARAKSSDSPSPGA
SNFGSGGGGGRAPSKPAPDRISPLKIKTEAIQPVNFDNNSAIWNFPPNREVMRSELPYRL
ATSEHFHPVPALHVAIPDSVLTPPGGADASGGQKTPFSSPATPPPAARSVLAAGTGTGGS
SDALSPPLSGSPREDKAQAAAYARELEMVHQRRLHAVLPLVTPHPVSGASPSPSPSSSVV
VGGSSSGPPPQGLYTTSTIRYAPADVALAMQGNLLPAAAAINFVDLNASAFGSGGGSAAD
SKAQVEMIYHHVQRLNMAGPFASPVGAAGLTQVPAGSVFTTAEALLSTLPFPMNTGSIHA
PQTLERKED
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagatggcaactcaatacaacaatgaactgaaatgtgttagcgtagagtgggac
ttccttcaaggactgctcgtaaagaaccaaccagtcccttgtttgcaagcccttcggaag
gagaagtctcgcaatgctgctcgctttcgacgggggaaagaaaactttgagttctacgaa
ttggcgaagatgcttccactcccgggagctatcaccagccagctggacaaggcctccatc
atccggttgaccatcagctacctccggatgagggactttgccaatctgggggatccccca
tggaacctgaggattgaggggcccccacctaacatctctgtaaaagcaataggatcccaa
cagaggagaagttccacttccttggccattgagttatttgaacagcacttaggaggacac
atcctacagtccttggatggttttatttttgcactaaatcgagaagggaaatttttgtac
atctctgaaactgtctccatctacctgggactgtcgcaggtggaactgacgggtagcagc
atctttgattacattcaccctggggatcatgtggaggtggcagagcagttgggactgaaa
ctaccaagcggccgagggcacagctcgcaaacctccaatgaggacggggcaagctcaaca
tcttcctcctcactggctgagacacctgagtcaggtaaggcagactctgggagtcccagt
ctcctgggtgatgataatgtgttggagcgcacattcttcattcgcatgaagtcaacactg
accaagcgaggggttcatgtcaaatcttcaggatacaaggttatccatgtcacagggcgc
ttgcgatctcggatttcattgcctcacgctcgtgctgttcccaccagcttcatgggaatg
gtggctctcgcccacacactcccgccttccaccattaatgaggttcggattgagtgccac
atgtttgtctccagggtcagtctggatctgcagatcatctactgtgaaaacaggatctcc
gattacatggacctatctaccactgatgttgtagggaaaaactgttatcacttcattcat
gctgaggatgttgaaggaatcaggcatagccacctggacttgttaaacaaggggcaggtg
gtcaccaagtattatcgctggatgcaaaagaacggaggttacatgtgggtgcagtccagt
gcaaccatctcgatcaatgtcaagaatggaaacgagaagaacatcatctgggtcaaccat
gtgctgagcaaaccagagcaccgaaatactccaatggacatctcccagcttccattgtca
gccattaaatcttccaagcaactggagttgtcggattcggaatctgattcccgagaacac
ttagaaagggacaatccaaaagacactggtaagcgaagcaattatgagaagttggcagca
cctcgctcagaaggctggaaacgatcagtgagccaatcagaggaagagttgacttcagcc
aaggacgacagtgactccagcctgccagatgactcggacagtgaggggccgagcaccggg
cggaggagctttgtcctgtccaaggtcaagcgcatgaaggtcgagggggatggcgaggtg
cggccggtggtgcgcgagccccggagctccctccccagtggcggtgatggggacactgat
agctcggaggatgagagcagcggcctggccagcaagccccagtacctaaagaggaagagg
aggcctcgcgagagctcggccgcgagggccaagtcatcagactcaccgagccctggtgcc
tccaactttggcagtggaggtggcggaggtcgggccccgtccaaacccgcacccgatcgc
atctctcccctcaagatcaaaactgaagccattcagcccgtcaacttcgacaacaacagc
gccatctggaactttccgcccaaccgtgaagtcatgaggagcgagctgccttaccgcttg
gcgacctctgagcactttcacccggtgccagctcttcacgtggctatcccggattccgtg
ctgacacccccagggggcgctgatgccagtggtgggcagaagactccatttagcagcccc
gccacgccgccccctgcagcccggtctgtcctggcagcaggaacagggacaggggggtca
tcggacgccctgtcgcctccactgtcaggctccccccgggaggacaaggcccaggcagcg
gcctacgcacgtgagcttgagatggtgcaccagcggcggctgcacgcggtgctgccgttg
gtgacccctcatcctgtgagtggagccagcccttccccttccccctcctcctccgtcgtc
gtcggtggtagcagcagcggccccccgcctcagggcctctacaccaccagcaccatccgc
tatgcgccagccgacgtcgccttggccatgcagggcaacctgctgccggctgccgctgcc
atcaactttgtggacctcaatgcctctgcctttggcagcggtggtggcagtgccgctgac
tcgaaagcccaagtggagatgatctaccatcacgtccagcggctcaatatggcggggccc
ttcgccagccccgtcggcgcagctggcttgacccaggtgccagcgggaagtgtcttcacg
acggctgaggccctgctctccacgcttcccttccccatgaacacgggcagtatccatgcc
ccccagactctggaacgcaaggaagattga
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