Chiloscyllium plagiosum (whitespotted bambooshark): 122542847
Help
Entry
122542847 CDS
T08871
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46 isoform X1
KO
K12590
exosome complex component RRP46
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122542847 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122542847 (exosc5)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122542847 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
122542847
NCBI-ProteinID:
XP_043536875
LinkDB
All DBs
Position
41:complement(10950548..10974066)
Genome browser
AA seq
220 aa
AA seq
DB search
MEASAESQQQLRPFGSEHSLLSRPDGSACFTQGDTTVLAAVYGPAEVKVSKEIFDKATLD
VLLKPKVGLPSVSEKSKEQMIRNTCEATILTALHPRSSITVVLQVIHDSGSLLACCLNAA
CMALMDAGLPMKSVFCGVTCVIDSNGDILLDPTSKMEKEAAAVLTFSIDSVEKQLLMSST
KGLYSVEELQQCVAMCQKAAEKIFQFYRDSVSRKYSKMSD
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggaggctagtgctgagagccagcagcaattgaggccttttggcagtgaacacagtctc
ctctccaggcctgatggctcggcttgcttcacacaaggggacacgaccgtcctggctgca
gtgtatgggccagcagaggtgaaagtcagcaaagaaatcttcgacaaggccacgctagat
gtcctcctgaagccaaaagttggattgccgagtgtctctgagaagagcaaggagcagatg
attcgaaacacgtgcgaagccaccatcctgactgctctccatccgcgctcttctatcaca
gtcgtgctgcaagtcatccatgactctggatctctattggcttgctgcctgaatgcagcc
tgcatggcactaatggatgctgggctgccgatgaaaagtgttttctgcggggtcacgtgt
gtgattgactccaatggagatatccttttagatccaacatcaaagatggagaaggaggct
gctgctgttctgacattttccatcgacagtgttgagaagcaattgctgatgtcgtccaca
aaagggttatactctgttgaagagctccaacagtgtgtcgcaatgtgccagaaagctgca
gagaaaatcttccaattctacagggattcggtgagcaggaaatactcgaaaatgagtgac
tag
DBGET
integrated database retrieval system
