Chiloscyllium plagiosum (whitespotted bambooshark): 122542861
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Entry
122542861 CDS
T08871
Name
(RefSeq) serine/arginine-rich splicing factor 7-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03040
Spliceosome
cpla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122542861
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122542861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpla03041
]
122542861
Spliceosome [BR:
cpla03041
]
Common components
Common spliceosomal components
SR proteins
122542861
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_5
zf-CCHC_5
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
122542861
NCBI-ProteinID:
XP_043536897
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All DBs
Position
41:11591337..11627680
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AA seq
226 aa
AA seq
DB search
MSYYSRSSRASDCKVYVGDLGTGAAKGELERAFSYYGPLRNVWVARNPPGFAFVEFEDPR
DAEDAVRGMDGKVLCGSRVRVELSNGMSRKSRYGRPPARRQFDPNDRCYQCGERGHYAYD
CYRYSKRRRGSSRSRSRSRSRSRSRSRGRRYTRSRSRSRDRRTRSRSPSYSKKRSRSLTP
LRSKSRSPIGRSPSRSRSRSRSFSIKRESRSPSEGSRKTPSPGRDD
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtattactccagaagttccagagcttcagactgcaaagtctatgtcggtgatttg
ggaacaggagctgccaaaggagagctggagcgagccttcagctactatggccctctaagg
aatgtttgggtagcgcggaatcctccaggttttgcttttgtggagtttgaagaccccaga
gatgcagaagatgcagtgcgtgggatggatggcaaggttctatgtggatcgagggtacgc
gttgagctgtcaaatgggatgtcacgtaaatcgcgctatggccgccctcctgctcgtcgc
cagtttgaccctaatgaccgttgctatcagtgtggagagcgtggccactatgcctatgac
tgctaccggtacagcaagagaaggcgtggcagcagtcgatctcgatctaggtctcgttcc
cgttcgagatccagatcaagggggcgtcgttacaccagatcccgcagccgcagccgcgat
cgccgcactcgttcccgttctccttcgtactctaagaagagaagtcggtcccttactcca
ttaaggtccaagtccagatccccaattgggagaagcccttcaagatcacggtctcgatca
aggtctttttcgattaaacgagaaagtcgctccccttcagaaggttctcgtaagacccca
agtcctggaagagatgactga
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