Chiloscyllium plagiosum (whitespotted bambooshark): 122542895
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Entry
122542895 CDS
T08871
Name
(RefSeq) ras-related protein ORAB-1-like
KO
K07874
Ras-related protein Rab-1A
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122542895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122542895
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpla04147
]
122542895
04031 GTP-binding proteins [BR:
cpla04031
]
122542895
Membrane trafficking [BR:
cpla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab GTPases
122542895
Autophagy
Other autophagy associated proteins
122542895
Exosome [BR:
cpla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122542895
Exosomal proteins of other body fluids (saliva and urine)
122542895
Exosomal proteins of colorectal cancer cells
122542895
GTP-binding proteins [BR:
cpla04031
]
Small (monomeric) G-proteins
Rab Family
Rab1/35 [OT]
122542895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
MMR_HSR1
Gtr1_RagA
SRPRB
CPT
FeoB_N
AAA_7
AAA_16
ABC_tran
AAA_5
AAA_22
Septin
AAA_29
PduV-EutP
LANC_like
TniB
Motif
Other DBs
NCBI-GeneID:
122542895
NCBI-ProteinID:
XP_043536959
LinkDB
All DBs
Position
41:16917150..16966540
Genome browser
AA seq
206 aa
AA seq
DB search
MSAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTV
KLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLEEIARYANENVNKL
LVGNKCDLTTKKVVDYTTAKEYADSLQIPFLETSAKNATNVEQAFVTMAAEIKNRMGTGP
THNDERSNVRIQSTPLKQGSGGGGCC
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccatgaatccggaatatgactacttgttcaagctgcttctgattggtgactct
ggtgttggcaagtcttgtctgctgctccggtttgctgatgatacatacacagaaagctac
ataagtaccattggtgtcgacttcaaaatccggaccatagaattagagggtaaaactgtt
aaactacagatttgggatacagctggacaagagcgcttcaggaccattacttccagttac
tacagaggagcacatgggattattattgtgtatgatgtcacagatcaggattccttcaat
aatgttaagcagtggctggaggaaatagctcgctatgctaatgaaaatgtgaacaaatta
ttagtaggaaataaatgtgacttgaccactaagaaggtggtagattatactacagctaag
gagtatgctgattctctccaaattccattcttggaaaccagtgcaaaaaatgccactaat
gttgaacaggcatttgtgacgatggctgctgagatcaagaaccgtatgggtacaggtcct
acacacaacgatgagaggtccaatgtccgaatccagagcactccattaaagcaaggcagt
ggtggaggtggctgctgctaa
DBGET
integrated database retrieval system
