Chiloscyllium plagiosum (whitespotted bambooshark): 122543001
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Entry
122543001 CDS
T08871
Symbol
pdlim2
Name
(RefSeq) PDZ and LIM domain protein 2 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122543001 (pdlim2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cpla04990
]
122543001 (pdlim2)
Domain-containing proteins not elsewhere classified [BR:
cpla04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
122543001 (pdlim2)
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Ortholog
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GFIT
Motif
Pfam:
PDZ
DUF4749
LIM
PDZ_6
PDZ_2
zf_C2H2_13
DZR
DUF6288
Motif
Other DBs
NCBI-GeneID:
122543001
NCBI-ProteinID:
XP_043537088
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Position
42:complement(250180..263893)
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AA seq
368 aa
AA seq
DB search
MSRTVKLCGPGPWGFRITGGRDFHKKITVSKVTSGSKADLVDLRLGDLITSINGTETSDM
LNMEAQNRIRMCEGDLILDIERPEAGSPGPLDGSPTNTFLAQRFESVLHTDKDENTNLVK
RRWSASNSPRSPNLTSVRSLSPAPDQKSISPNTNMRTVSPAWSSEEKEETAFRGNMVPKG
FQAGIQVRRSLSPVSSSYSVPRVSHSTDSSPSEVRHRTERSHSPSSAALSNRVPDRRSSN
HIDKDSEVYKMIQENRAAKEPPRQSNRFRQLQEALDADQDGAVVQFPGRFSPSAPNTPVP
KYRVCEKCGSSITTEVVKIRDGCYRHQQCYACTDCGLNLSMRGHFWFQDQMYCEKHAQKR
FQEAEGSS
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggacggtgaaactgtgtggccccggaccctggggattccgtattaccggcggc
agagactttcacaagaaaatcaccgtctccaaggtcactagtgggagcaaagcagactta
gtggatctccggctgggagacctgatcacgagcatcaatgggactgaaacctctgacatg
ctcaacatggaggctcagaaccggatcagaatgtgtgaaggggatctcatcctcgacatt
gagaggccagaggcaggttcccctggaccccttgatggatctcccacaaacactttcctt
gcacagagattcgagagtgtcctacacacggacaaggatgagaatacgaaccttgtcaag
agaaggtggagtgcaagcaacagtccacgatccccaaacctcacatctgtccgatccctc
tctcctgcacctgatcagaaatccatctctcccaatactaacatgaggactgtatcccca
gcttggagctcagaagagaaggaggagacagcatttcggggaaatatggtgccgaaggga
ttccaagcagggattcaggtccgcaggagcctctctcctgtctccagttcctactctgtg
cccagagtgagccactccacagactcgagtccctcggaggtaaggcataggactgaaaga
tcacactctcccagctctgccgctctgagcaacagggtcccagatcggcgttcctcaaat
catatcgacaaagactcggaggtttataagatgatccaggagaaccgagctgcaaaggaa
cctcctcgacaatccaatcgtttccgtcagcttcaggaggcactggatgcagaccaggac
ggagcagtagttcagttcccgggaagattctctccctccgccccaaacacaccagtgccc
aaatatcgtgtgtgtgagaaatgtggatcaagcattacgacggaggtggtgaagattcga
gacggctgttaccggcaccagcagtgctacgcctgcactgactgtggcctgaacctcagc
atgagaggccatttctggtttcaagatcagatgtactgtgagaaacatgctcagaaacgg
ttccaggaagcagaggggagctcatga
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