Chiloscyllium plagiosum (whitespotted bambooshark): 122543169
Help
Entry
122543169 CDS
T08871
Symbol
polb
Name
(RefSeq) DNA polymerase beta isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122543169 (polb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpla03400
]
122543169 (polb)
Enzymes [BR:
cpla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122543169 (polb)
DNA repair and recombination proteins [BR:
cpla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
122543169 (polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
122543169 (polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
HHH_8
DNA_pol_lambd_f
HHH_5
NTP_transf_2
HHH_2
Cdd1
Motif
Other DBs
NCBI-GeneID:
122543169
NCBI-ProteinID:
XP_043537515
LinkDB
All DBs
Position
42:15067085..15176772
Genome browser
AA seq
335 aa
AA seq
DB search
MSKRKAPQETLNEGITDFLIELANFERNVNRAMHKYNAYRKAASVIAKYPTKIKSGAEAK
KLEGVGDRIAKKIDEFLATGKLQKLEKIRQDDTSSSINFLTRVTGIGPAAARKFVEEGIK
TLDDLRENEHILNYHQRIGLKYFEDFEKRIPRCEMVKMQAIVLREVEKLDPNYVAIICGS
FRRGAESSGDMDILLTHPDYTSESLKRPKLLNPVVECLEAINFVTNTLSKGDAKFMGVCR
LPDDSDGSDYPFRRIDIRVIPKDQYFCGVLYFTGSDLFNKNMRTQALEKGFTLNEYTIRP
VGSTGVPGEPLPVESEKDIFDYIDWEYREPQERSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaggaaagcgccgcaagagacgctcaacgaggggattaccgacttcctaatc
gaactggctaactttgagaggaatgtgaaccgggcaatgcacaagtacaatgcatacagg
aaagcagcttcagttattgcaaagtatccaacaaagatcaagagtggtgcagaagccaaa
aagctggaaggagttggtgacaggattgcaaagaagattgatgaatttctcgcaacaggg
aaactgcaaaaattagaaaagattcgtcaagatgatacaagttcgtcgattaacttttta
acgagagtgactggaataggaccagcagcagcacgaaaatttgtcgaagagggaatcaaa
accctggatgatctcagagaaaatgaacacatactaaattatcatcagcggattggttta
aagtattttgaggattttgaaaagcgaattcctcgatgtgagatggtgaaaatgcaggcc
attgtcctgcgggaagtggagaaactggatccaaattatgtcgccatcatttgtggcagt
ttcaggcgaggtgctgagtccagtggtgatatggatattcttttgactcatccagactac
acttcagaatcattaaaaaggccaaagctcctcaatccagttgtggaatgcctggaagcg
ataaattttgtcacaaacacactttccaaaggagatgccaaattcatgggtgtctgccga
ttgcctgacgatagtgatggtagtgactatccattcaggagaattgacattagagtaatt
ccaaaagatcagtatttctgcggtgtgctttatttcactggcagtgatctttttaacaag
aacatgaggacccaagcactggaaaaaggcttcacattgaatgagtacacaattcgccct
gtgggaagcacaggagtgccaggggaacccctgccagtggaaagtgaaaaggacatcttt
gattacattgattgggaatatcgagagccacaagaacgaagtgagtga
DBGET
integrated database retrieval system
