Chiloscyllium plagiosum (whitespotted bambooshark): 122543233
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Entry
122543233 CDS
T08871
Symbol
lgi3
Name
(RefSeq) leucine-rich repeat LGI family member 3
KO
K19999
leucine-rich repeat LGI family member 3
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122543233 (lgi3)
Membrane trafficking [BR:
cpla04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
122543233 (lgi3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
LRR_14
Motif
Other DBs
NCBI-GeneID:
122543233
NCBI-ProteinID:
XP_043537644
LinkDB
All DBs
Position
42:complement(14752385..14762716)
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AA seq
447 aa
AA seq
DB search
MIQNDAFNGLSHLQYLFIENNNIQSLSKYTFRGLRSLNHLSLGNNNLLALPRDIFRDLHV
LTHLDLRGNAFHCDCKVKWLMEWLQLTNTSVPPVYCSSPMKYQNVRVTHLPVKEFDCIRT
EFSVYQTLPFQAVSVESFVYADDLFVTFAQANSGNCSFFVWDHVEMVFRTSANISAHAAV
YCKPLVIDGQLYIVLAQLFRGSHIYRWDGYGGTFVRIQDIDAARIQKPNDIETFTIDGEW
YFVIADSSKAGSTTVYKWNKVGFYSHHSLHPWHRDTDAEYIETDNKPKLILASSTQTPVI
YQWSKSQRQFTYLTEIPDMLDVHAVKHFQFGKALYLCLVRFIGDSKLVKWEGQRFTEIQA
LPSRGSMVAQPFRVAHWQYLVLGSDFSFSHVYLWDAGKLSFSRFQDWSVRTPRAFQAVPI
HSVHLVLASSFKGSTIVYRHLVIDTSA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaaatgatgcgttcaatggtttatctcatctccagtatctattcatagagaac
aacaacatccagtcgctctccaaatacacattccgaggcctcagatctctcaaccatcta
tccctgggaaacaacaatctgctggcacttccgagagacatcttcagggatcttcatgtt
ctgacacatttggatctccgtgggaatgctttccattgtgattgtaaggtgaaatggctg
atggaatggctgcagctgaccaacacgtcagtccctccagtgtactgttcaagcccgatg
aaataccagaatgtcagggtgacccacctgccagtgaaggagtttgactgcatcaggaca
gaattcagcgtttaccaaaccttgcctttccaggccgtgtccgtcgagtccttcgtttac
gccgacgacctctttgtaacctttgcccaggccaacagtgggaactgcagtttcttcgtg
tgggatcacgtcgagatggtcttccggacatcggcgaatatctctgctcacgctgcggtc
tactgcaagccgctggtgatcgacgggcagctgtacattgtcctggcgcagttgttccga
ggctcccacatctaccggtgggacggctacggggggacattcgtcaggatccaggacatc
gacgccgccaggatccagaaacccaacgacattgagaccttcaccatcgacggcgaatgg
tactttgtgattgcagacagttcgaaggctggctccaccaccgtttacaagtggaacaag
gtgggattctattcccaccactccctccacccctggcaccgggacacagacgctgagtac
atcgagacggacaacaaacccaagctgatcctcgccagcagcactcagaccccggtcatc
taccagtggagcaagtcgcaacggcagttcacctacctgaccgaaatccccgacatgttg
gacgtgcacgctgtgaagcacttccagttcggcaaggccctgtacctctgcttggtccgt
ttcatcggcgactccaagctggtgaagtgggagggccagcgcttcaccgagatccaggcc
ctgccctccaggggctccatggtcgctcagcccttccgcgtggcacactggcagtacctg
gtgctggggagcgatttctccttctcccacgtctacctctgggacgccgggaagctgagc
ttcagccgcttccaggactggagcgtacgcacgccccgggcgtttcaggcggtgcccatc
cacagcgtgcacctggtgctggcttccagcttcaaagggagcaccatcgtctacagacac
ctggtgatcgacaccagtgcttag
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