Chiloscyllium plagiosum (whitespotted bambooshark): 122543279
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Entry
122543279 CDS
T08871
Name
(RefSeq) arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K12491
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122543279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122543279
Membrane trafficking [BR:
cpla04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
122543279
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Gene cluster
GFIT
Motif
Pfam:
ArfGap
Ras
Ank_2
Ank
PH
Ank_4
Ank_5
PH_6
Roc
Motif
Other DBs
NCBI-GeneID:
122543279
NCBI-ProteinID:
XP_043537704
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Position
43:654409..855106
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AA seq
1235 aa
AA seq
DB search
MNRGAILQRRTTFHISLTLVKLEPLSDGGSGSETCQRDKATSSEEEPDAKAAGKISLLYG
NKNASGQRPKGPQNLRLNVIENVEPIESRTIDDRSSFSIRNDELGAGARSAWVEVHELPS
KVQVEPTLKSVNKSENVGLLSFSTLCAKSTGQCRHTDFNGANEKNQDDHIQPPCQLCAVA
KIEENLASPLALEKSHTKTQTEVDHPRRSEAEGVLKDQTEKAMSLHIPPEQSLESKCLDI
QIEKKAQVERDLPQEKAMTVSQHVEKSNVKPKPQSLPVIAEKSPGMLRSSSGNQGKAEPI
KTSGKKEKNLRHTNCLSWQETEMKMKIQMSNRKYSRVESLRSTGEMFHRRGTQVTTEQGK
GKSRTLDNSDIHTLSEDLEQGRGIPTPERTKSNARDRKMLKFISGIFTKSAGAVSVSPAS
GGLTQREFAAGAKGPSSNQKAFVNSQEWTLSRSVPELRLGLVGSLCSGKSALVHRYLTGT
YVHDESPEGGRYKKEINVNGQSHLLLIRDEGGPPDAQFSTWVDAVIFVFSLENEKSFEAI
YNYYTRLASYRNTAEIAVMLVGSQDAISATNPRVIDDARARKLCADLKRCMYYETCATYG
LNVDRVFNEVTQKISAIKKQQHLFATSCKSLPSSPSHSAASTPVSTIHSGQASNGGNMSD
YSSSLPSTPNISHRDLRADVCQASGTPGSVRKHSKRRSSLFATRRGSDTERRSLDSKADN
IGSGRAIPIKQGVLLKRSGNSLNKEWKKKYVTLCNNGILSYHPSLHDYMQNIHGKEIDLL
RTTVKVPGKRPPRAVSTSGASTSLNGLMGSGQESVDSLHAGGLDPVAEQAIVGDTKVKGK
FPNCSSISSSEQWSENSSKTAEGATIGEGISSPSSSKLDSPPSPQINRRKHRRKKSVSRA
DGMMGLAEAKRRVWKLKRFGSLRNIYRAEQEENIEFTIVSSTGQMWYFEAVNFEERDAWV
QAIESQILASLQSCESSKNKARMDSRSEAVALQAIRNAKGNSFCVDCAAANPTWASLNLG
ALICIECSGIHRNLGTHLSRVRSLDLDDWPLELTLVLTSIGNEMANSVWEKNTQGRSKPT
PESTREERENWIRAKYEQKLFLASLKYRDIPIGKQLFRAVMEKDLHSILLLLAHAKKEHI
NEWTEDKDKRTALHLACERKDVVVTQLLVWYGIDVKARDVNGNTALYHARRAGGQECMDV
LLQHGCPSDGCSMTPSFSRKSISASLERTEPRLPY
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaggagcaatcttgcaacgaaggactacttttcatatctctctcacgctagtg
aaattagagcctctgagcgatggaggcagtgggagtgagacttgtcagagggacaaagct
acctcatcggaagaggaacctgatgccaaggctgcaggaaagatttctttattgtacggc
aacaaaaatgcttctggccagcgacctaaaggtccccaaaatttgaggttaaatgttatc
gagaatgtggagccaattgaatctagaacaatagatgatcgaagcagcttcagtattcga
aatgatgaattgggtgctggtgccagatcagcctgggttgaagtgcatgaattaccaagc
aaagtccaagttgaaccaacgctaaaatctgtgaataaatctgaaaatgtaggattgttg
tctttttctacactctgtgccaagtccacaggccagtgcagacatactgattttaatggt
gctaatgagaagaatcaagatgatcacattcaacccccatgccagttgtgtgctgttgcc
aagattgaggagaatcttgccagtcctttggctttggagaaaagccacacgaaaacacag
actgaagttgaccatccgagaagatctgaggcagaaggagtcttgaaagatcaaactgag
aaagccatgagccttcacatcccaccagagcaatcactagaaagtaaatgtcttgatatt
caaatcgagaagaaagctcaagttgaaagggacctgccacaagaaaaggctatgactgtt
tctcaacatgtggagaaaagtaatgtaaaacctaagccccaatctctgcctgtgattgct
gagaaaagtccaggtatgctgagaagttccagtggcaaccagggtaaagctgaaccaatt
aaaacctcagggaaaaaggaaaagaatcttcgtcataccaactgcttgtcttggcaagag
actgaaatgaagatgaaaattcaaatgagtaacaggaagtattccagagtagaaagcctg
aggagcactggggagatgttccacaggagaggtacacaggtaacaactgaacaagggaag
ggaaagagcagaacactggataacagtgacattcatactctttctgaagaccttgaacaa
ggccggggcatcccaacgccagagagaaccaagtccaatgcacgggatcgaaagatgtta
aaatttatcagtggaattttcaccaagagtgcaggcgctgtgtctgtctcacctgcaagt
ggtggattaactcaaagggagtttgctgctggagccaaaggtccctcctcaaatcaaaag
gcctttgtaaacagccaggagtggacgctaagtcgctcagtcccagagctccggttggga
ttggttggtagtctgtgcagtgggaagtctgcacttgtacatcgatacctgactggcacc
tatgtccatgatgagtctccagaaggtggtcgatacaaaaaggaaatcaatgtcaatggt
cagagccatttgctgctgatcagggatgaaggaggtcctccagatgcacagttttcaacc
tgggtggatgctgttatatttgtcttcagcttggaaaatgagaagagctttgaggccatt
tacaattactacaccagactcgcgagctaccggaatacagctgagattgctgtgatgctg
gtgggatcacaggatgcaatcagtgctaccaatccacgagtcattgatgatgctcgggca
cgaaaactctgtgctgacctaaaacgctgcatgtattacgaaacatgcgcgacatatgga
ctcaatgtcgatcgagtgtttaatgaagtcacacagaagatctcagccattaagaaacag
caacacctttttgctacatcatgcaagtctttgccaagctctccaagccattcagctgcc
tctaccccagtctctactattcacagcggtcaggcaagcaatggtggaaacatgagtgat
tattcatcttctcttccctccactccgaacatcagtcaccgggatctgcgggctgatgtt
tgccaagcctctggtactccgggttctgtccgcaaacattcaaaaagacgttcaagtctt
ttcgctactcggcggggaagtgatacagagcggaggagtctagacagtaaagcagataat
attggaagtggccgtgcaatcccaattaaacagggtgtgttgttgaagaggagtggaaac
tcgctaaacaaagagtggaagaagaaatatgttacactgtgtaacaatggtatcttgtcc
tatcatccaagtttacatgattatatgcagaacatccatggaaaagagattgatcttctc
aggacaacagttaaagttcctggcaagcggccaccccgtgctgtttcaaccagtggtgcc
tccaccagcctgaatggactcatgggcagcgggcaagaaagtgttgattctctgcatgct
ggtggtttagaccctgttgctgagcaagcaattgttggtgataccaaggtcaaaggaaag
ttcccaaactgctcctccatttctagtagtgaacagtggagtgaaaatagttcaaaaact
gctgaaggggctaccataggtgaaggcatctcaagtccctcaagcagcaagctggactcc
ccaccctcaccccagataaaccgaaggaaacatcgcaggaagaagagtgtgagcagggca
gatggcatgatgggattggcagaagccaaacgcagggtgtggaaattaaagcgttttggt
agtttaagaaatatttacagagcagaacaagaggagaacattgagttcactattgtctcc
agcaccggccagatgtggtactttgaagcagtgaactttgaagagagggatgcctgggtc
caagccattgaaagtcaaatcctggccagtctgcagtcctgtgaaagtagcaagaacaag
gctcggatggacagccggagtgaagctgttgcccttcaggcgataagaaatgccaaagga
aattcattctgtgttgactgcgctgctgcaaatcctacctgggcaagtctgaatttggga
gcactcatatgtattgaatgctcagggattcatcgtaatcttgggacccatctttcacga
gtacgatctctggatcttgatgactggcctttggagctaactctcgtgctgacgtctatt
ggaaatgagatggcaaacagtgtgtgggagaagaatactcagggacgcagcaagcccact
ccagaatctacacgggaagaaagggagaactggatcagagcaaagtatgagcagaaattg
tttcttgcatccttgaaataccgcgacattcccattggaaagcagctgtttcgagctgtt
atggagaaggaccttcacagtattttactactgcttgctcatgccaaaaaggagcacatc
aatgaatggactgaagataaagacaaacggacagctctgcatctcgcctgtgaacgaaag
gatgtagtagtgacacagcttcttgtctggtacggcattgatgtaaaggccagagacgtg
aatggaaacacagctctgtaccacgcccggcgagcaggtggccaggagtgcatggatgtt
ctgttgcaacatggttgtcccagtgatggctgcagtatgacacctagtttcagcaggaaa
agtatcagtgccagtctcgaaaggactgagcccaggcttccatattaa
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