Chiloscyllium plagiosum (whitespotted bambooshark): 122543302
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Entry
122543302 CDS
T08871
Symbol
pym1
Name
(RefSeq) partner of Y14 and mago isoform X1
KO
K14294
partner of Y14 and mago
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03013
Nucleocytoplasmic transport
cpla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122543302 (pym1)
03015 mRNA surveillance pathway
122543302 (pym1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122543302 (pym1)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122543302 (pym1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago-bind
CDGP
Motif
Other DBs
NCBI-GeneID:
122543302
NCBI-ProteinID:
XP_043537744
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Position
43:complement(4423956..4438536)
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AA seq
210 aa
AA seq
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MVGETGAISGWSIMAAYVTDETGKYIPASQRPDGTWRKPRRVREGYVPQEEVPVYENKYV
KFFKSKPDLPPGLNPDETAKSKQQQSKHDGELAGLSKSAKRNLKRKEKRKQQQESDGTAE
ADELSQTLQKTTIGGGGSSPNSQAVALQGDHDGVEKAKKVKNLKKKLRQIDELQQKLDSG
EIKQATKEQLDKLSRRKLLEEELEGLELGL
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggtaggggagacgggcgcaatttccggctggtctatcatggcggcctatgtgacggac
gagacgggcaaatatattcctgcctctcagcgccctgatgggacctggcggaaaccaaga
cgagtaagggaaggatatgtacctcaggaagaggtgccagtgtacgaaaacaagtatgtg
aagtttttcaaaagcaaacccgacctgccacctggccttaacccagacgaaaccgccaaa
agcaagcagcaacagtcaaagcacgacggagagctggctgggttatccaagtcagctaaa
cgcaacctcaagcgcaaagagaagcgcaaacagcagcaggaaagtgacggcaccgccgag
gccgatgagctgagtcaaacattgcagaaaaccaccattggcggcggtggtagcagtccg
aactctcaggctgttgcgttgcaaggtgatcacgatggagtagagaaggcaaagaaggta
aaaaatcttaaaaagaaactgcgccaaattgatgaactgcagcaaaaactagactctggt
gagattaaacaggcgaccaaagagcagctggacaagctgagccgccgaaaactgctggag
gaggagctggagggtttggaattgggtttatag
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