Chiloscyllium plagiosum (whitespotted bambooshark): 122543311
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Entry
122543311 CDS
T08871
Name
(RefSeq) sonic hedgehog protein A-like
KO
K11988
sonic hedgehog
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
122543311
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpla01002
]
122543311
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cpla00536
]
122543311
Peptidases and inhibitors [BR:
cpla01002
]
Cysteine peptidases
Family C46: hedgehog family
122543311
Glycosaminoglycan binding proteins [BR:
cpla00536
]
Heparan sulfate / Heparin
Morphogens
122543311
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Ribosomal_S6e
Hint_2
Vint
Motif
Other DBs
NCBI-GeneID:
122543311
NCBI-ProteinID:
XP_043537760
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Position
43:5085223..5191389
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AA seq
410 aa
AA seq
DB search
MQPGSELARFGLLCCCLLVPVQNCGPGRGYGRRRPSRKLAPLLYKQFIPNVAEKTLGASG
RSEGKISRTSEKFKELTPNYNPDIIFKDEEDTGADRLMTQRCKDKVNSLAISVMNQWPGV
KLRVTEGWDEDGHHSKESLHYEGRAVDITTSDRDRTKYGMLARLAVEAGFDWVYYESKAH
IHCSVKSDNSLATKTGGCFPSKAMVTLENGQTRAVSELNPGDWVLTVNAVGQVVPSQVLL
FLDKEEELRISFTVLETEDPRQRLELTAAHLIFVSDNNTDRMENFRPTFASRVRTGQFVL
VREIGSGQLRSSRIKAIYVEEDTGAYAPLTSHGTLLVNNVLASCYAMIEKHHWAHLAFAP
LRLFHSLTSLLPVLHPRYDNATQESGIHWYSRFLYSLGEKVLDREMFHSL
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccggctccgaattagctcgcttcgggctgctgtgctgctgcctcctggtcccg
gtgcagaactgtggccccggccggggttacggcaggaggagaccgtcccgtaagctcgcc
cccttgctctacaagcaattcatccccaatgtggccgagaagaccctgggggcgagcggc
aggtcggagggcaagatcagccgcacctccgagaaattcaaggagctgactcccaactac
aaccctgacatcatcttcaaagacgaggaggacaccggagctgaccgcctcatgacccag
cgctgtaaggataaagtgaattcacttgcaatctctgtgatgaaccagtggccaggtgtg
aagctccgggtaacagagggctgggatgaagatggacatcattcaaaggaatccttgcat
tatgagggccgagcagtagacatcaccacttctgacagggatcgcaccaagtatggcatg
ctggcccgtttggcagttgaggctggatttgactgggtttattatgagtcaaaagcccac
attcattgttcagtgaaatcagataattcattggccactaaaacaggtggctgtttccct
tctaaagccatggtaacactggaaaatggacaaacccgagctgtgtcagagctgaatcct
ggggactgggtcttaacagtgaatgcagttggccaggtggtccccagtcaagtccttctc
tttcttgacaaagaagaagaactgagaatctcttttactgtgctggagactgaagatccc
agacagcggctggaactcacagcagcacacctcatctttgtttctgataataacactgac
agaatggagaactttagaccgacatttgctagtcgagtacgtacgggtcagttcgtcctt
gtgagagagattggctcaggccagttgcgttcatctaggattaaagctatctatgtggaa
gaggacactggtgcctatgcaccactgacatctcatggcacattgttagtgaataatgta
ctggcatcttgttatgcaatgatagagaagcaccattgggcacacctggcatttgcacct
ctcagactctttcactcattgacttctttgttaccagttctccatcctcggtatgacaat
gccacacaggagagtggcatccattggtactccaggtttctctacagcttaggtgaaaag
gttctagacagggaaatgtttcactctttatga
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