Chiloscyllium plagiosum (whitespotted bambooshark): 122543360
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Entry
122543360 CDS
T08871
Name
(RefSeq) LIM domain and actin-binding protein 1-like isoform X1
KO
K23026
LIM domain and actin-binding protein 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpla04812
]
122543360
Cytoskeleton proteins [BR:
cpla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
122543360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
122543360
NCBI-ProteinID:
XP_043537911
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All DBs
Position
43:9176421..9319511
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AA seq
821 aa
AA seq
DB search
MERSSFTRGQWTSQSLRITAKELSIVNKRGTAALRERFSKYQKAAEEASSERKKGNTENL
PPTLRKGTLSILKKKWEIPESSTAQPVPPKSPVRINRADSRAQIAAVSPKADSSFVPLSE
SDQNLETTTRVKSPRSPGVLSRFPYPGTECEGQAELKMEKMLSKEGNEVENGTAQDLTIS
PKIEKFNVPLNSLKMMFEKGDAHIPLKHRHHEIPAKANKDQHLKSDVSKKWLDKTAEASC
LIEDIERKAREENSSGFDHTSPGTSPDKTESKVGTKLADMQEQTSVKDRMALYQATASQK
ETSIQSPTTLDEQMLSGEVINTKEQWGIKDSSNPKRLPQCDISTSDLEMNAGNRNEQKEN
VPPVPLTNTSSHAELQKESVIETSNLWKSSTYEKPGNSQVNVEKEEGTPKLSTLGINQQR
STAEIQSSPAKSVKKFQLPARELCVTCQKTVYPMERLVANQQVFHNFCFRCSHCNTKLSI
GNFASLHGNVYCKPHFSQLFKSKGNYDEGFGHKPHKELWMAKTEPDTAEHKNEVVMDKSE
AKTENSGVDELSIRKVGVLAASMEALNTSNSPEKAEKPVETRKLKIAWPPPTEAGSKGIG
CSEESLRVNKPKWPPEDDFQHLTKRNSEFSGTSRLRRSASLKERCRPFTIAAPLRPIAIK
EPGRNLSAKNITQDVITKEREAKRETEQQKNENKSSLDNEHEQPVTTELKGMKEDPVTEE
VVEVKSKKELLQDKDVEELHFRKEEAREPNFLECEEQQSKQKTVELQTSGDMLALDEHIP
ENETKLEDVGFWDGEENEVEETEELSVEEQIKRNRCYEDED
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggagcgatcatcatttaccagagggcaatggacatctcagtccctgcggattactgcc
aaagagctgtctatcgttaataaaaggggaacagcggctctgagggaacgtttttctaag
tatcagaaagcagcagaggaagcaagcagtgaacgaaagaaggggaacactgaaaatctt
cccccgaccctgaggaaagggacattgagcatcttgaaaaagaagtgggaaattccagaa
agttccacagcacaaccagtgcctccaaagtcgcctgtcagaattaatcgtgcagattcc
cgggctcagattgctgctgtcagcccaaaagcagactccagctttgtgcctctaagtgag
tcggatcagaatttggagactaccacaagagtcaagtctcccaggagcccaggggtcttg
agcagatttccttatcctggtacagagtgtgaaggccaggctgagttaaagatggaaaaa
atgctttctaaggaggggaacgaagtggagaatggaacagcacaagatttgacaatctcc
cctaaaattgagaagtttaatgtcccactgaacagcttgaaaatgatgtttgagaagggg
gatgcacatattccgcttaagcacagacaccatgaaatcccagcaaaggctaacaaagat
cagcatctcaagtctgatgtttccaaaaagtggctagacaagactgcagaagccagttgt
ttgatcgaagacatagagagaaaagcaagggaggaaaactcaagtggttttgaccatacc
tcgcctggaacaagccctgataaaacagaatctaaggttggtacgaagttggcagatatg
caggaacagacatcagtgaaagacagaatggcattataccaggcaactgcatcacagaag
gagaccagcatccaatctcctacaactttggacgagcaaatgctgtctggagaagtgatc
aataccaaagagcaatggggaatcaaagactcatcaaatcctaagaggttgccacagtgt
gacataagcactagtgaccttgaaatgaatgctggcaataggaacgaacaaaaagaaaat
gtgccaccagtacctttgaccaacacctcttcccatgcagaactgcagaaggagtctgtg
attgagacatcgaatctttggaaaagctctacttacgagaaaccaggaaatagtcaagtt
aatgtggaaaaagaagaagggacgccaaagctttcaactctgggtataaatcaacagaga
tcaacagcagaaatacaaagtagtccagccaaatctgttaagaaatttcagcttccagcc
agagagttgtgtgttacctgccaaaagactgtctatccaatggagcgtcttgttgcaaac
cagcaggtgtttcataatttctgcttccgctgcagccactgcaacactaagctcagcatt
gggaattttgcttcactacatgggaatgtgtactgcaaaccacatttcagccagctcttc
aaatccaaaggtaattatgacgagggatttggtcataagccacacaaggagctgtggatg
gctaaaactgagcctgatactgcagaacacaagaatgaagttgtcatggataaatctgag
gccaaaactgagaattctggagtagatgaactttccatacgcaaggtaggtgttttggct
gccagcatggaagccttaaataccagtaattcaccagaaaaggcggagaaacctgttgaa
acaagaaaattaaaaatagcttggccaccacctactgaagcaggtagtaaaggaatcggc
tgctctgaagagagcctccgagttaacaaaccaaaatggcctccagaggatgatttccaa
cacctgaccaagagaaactccgaattcagtggtacctccagactgaggcgaagtgcttct
ctgaaagaacgatgtagaccgtttaccattgcggcaccgctgagacctatagccattaaa
gagccaggaagaaatctgtctgctaaaaatataacccaggatgtgatcactaaagaaaga
gaagctaaaagagagactgaacaacagaagaatgaaaacaagtcaagtctggataatgag
catgagcaaccagtgactaccgagctcaagggcatgaaagaagatcctgtgactgaagag
gttgtagaagtcaaaagcaaaaaagagctgcttcaagataaggatgtagaggaacttcac
ttccgcaaagaagaggccagagaacctaacttcttggagtgtgaagagcagcaatccaaa
caaaaaacagttgaattgcaaacttccggagacatgcttgcattagatgagcacattcca
gagaatgagacaaaactggaagatgttggtttttgggatggggaggaaaatgaagtggag
gaaactgaggaactgtcagttgaagagcaaatcaagagaaatagatgttatgaagatgag
gattag
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