KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122543401
Entry
122543401         CDS       T08871                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122543401
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpla03019]
    122543401
   03041 Spliceosome [BR:cpla03041]
    122543401
Messenger RNA biogenesis [BR:cpla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     122543401
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122543401
Spliceosome [BR:cpla03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    122543401
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3
Other DBs
NCBI-GeneID: 122543401
NCBI-ProteinID: XP_043538036
LinkDB
Position
43:complement(14309269..14320416)
AA seq 490 aa
MSNRRAPIGPPPSSFPRGALASPGPRGCPCLYKGEAGAAAGLFGRGRRRQQRLCLCLSLF
ASALNIVLFFFCFSGSHTPPHPTGKTAPSYERDMEDSQEPEQLRKLFIGGLSFETTDDSL
RNHFEQWGRLTDCVVMRDPTTKRSRGFGFVTYSCVSEVDSAMSARPHKVDGRVVEPKRAV
SREDSTRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEKFGKIEVIEVMTDRQSGKKRGFAF
ITFDDHDAVDKIVVQKYHTVNGHNCEVRKALSREEMQNSGMNQRGRGSSGNFGRGNFGNS
GNFGRGGGGGGNFSNRGGFGGSRGGGGNYGGCGDGYNGFGDGGGYGGGGGFGGGGGRGGP
GYGGSPTYGNQGGGGYGGGGGSGSGYDGYGGGFGGNFGGGGGGGGNYNDFGNYPNQQSSN
YGPMKGGGGGGYGGRSSAPYGGTQYLAGEDEPGDCNRETAGYYNTNLSQAQGTTATGREA
NVFLVRKVSV
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgtccaaccggagagcgccgattggccccccccccagctctttcccacgtggggcgctg
gcgtcacccggaccacgtggctgcccctgcctatataagggggaggcgggcgcggcggcc
ggtctctttggtcgcgggcgtcggcggcagcagaggttgtgtctgtgtctctcgctcttt
gcgtcggcattaaatattgttttattttttttttgtttctccgggtctcacacgcccccc
cacccaaccggcaagacggcgccctcgtacgagagagacatggaggactctcaggagcct
gaacagttgcgcaaactgttcattggtggcttgagctttgaaacgacagatgacagtcta
cggaaccactttgagcaatggggccggctgacagactgtgtggtgatgagagacccgact
acaaaacgctccaggggctttgggtttgtgacctattcgtgtgtctcagaggtggacagt
gcaatgtcagcaaggcctcacaaggttgatggtcgtgttgtggaacctaaacgtgctgtg
tcaagagaggactccaccaggcctggagcgcacttgactgtgaagaagatctttgtgggt
ggcatcaaagaagacacagaagaacatcatctccgggattactttgagaaattcggcaag
atagaagtgattgaagtaatgacagaccgccagagtgggaaaaagaggggttttgccttc
attacgttcgatgaccacgatgctgttgacaagattgttgttcagaagtaccacacagtg
aatggacacaactgtgaagttaggaaggccctttcccgtgaagagatgcagaactccggc
atgaaccagcgagggcgaggaagctcgggcaactttggtcgaggcaactttggcaactcc
ggtaactttggtcgtggtggtggaggaggagggaacttcagtaacagaggtggatttggt
ggttccagaggaggtggtggcaactatggaggctgcggtgatggctacaatggttttggt
gatggtggtggatacggtggcggtggtggctttggaggtggtggtggccgtggaggtcca
ggctatggtggcagcccaacatatggcaaccagggtggtggtggatacggtggtggaggc
ggcagcggcagtggatatgatggctatggcggtggatttggtggcaactttggaggtggt
ggtggcggtggcggaaactacaatgactttggcaactatccaaaccagcagtcgtctaac
tatgggccaatgaagggtggtggaggaggcggctatggtggcaggagctctgcgccttat
ggaggaacacagtacttagcaggcgaggatgagccaggagattgtaacagggagacagca
ggttactacaatacaaatctcagccaagcacagggcacaactgctaccggaagagaagca
aatgtctttttagtcagaaaagtcagtgtttga

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