Chiloscyllium plagiosum (whitespotted bambooshark): 122543801
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Entry
122543801 CDS
T08871
Name
(RefSeq) splicing factor 1-like isoform X1
KO
K13095
splicing factor 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122543801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpla03041
]
122543801
Spliceosome [BR:
cpla03041
]
Complex A
Other components
Complex A specific factors
122543801
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_5
SLU7_N
zf-CCHC_3
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
122543801
NCBI-ProteinID:
XP_043538520
LinkDB
All DBs
Position
45:complement(1326952..1346125)
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AA seq
552 aa
AA seq
DB search
MASGAHTSPAGGKMLQAVGNKRGIESPALDDDFGQKRRKRSRWSNETSDQKTVIPGMPTV
IPPGLTRDQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREF
RTRKKLEEERHNLIQEMIALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGP
RGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAV
EQIRGILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSTEPRSITNTTLC
TKCGGAGHIASDCKFSRPGDPQSAQDKARMDKEYLSLMAELGEAPVPASSSSHTSSAQPS
VPRTSGPASSQQQLPNRPPWMNSGPSDANRPYHGMHGGPHPGFPPPMPSMGGHPLSHNPN
GPPPPWMQPPPPPMSQGHHPVHPPMNMMHHPMGMLPPPPPPPASQPPPPPSGPIPPWQQQ
QAQQQQQQQPPPPPSSSMASSAPLPWQQSGASSEGAARRIKRGPVSSQLPPQIAGLAMEP
LLSRRWTVKGGY
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggggcccacacctcccccgcgggcggtaaaatgctgcaggccgtgggcaac
aaacgcggtatcgagagcccggcgctcgacgatgactttggacagaagaggaggaaaaga
agtcgctggagcaatgagacttcggatcagaaaacagtcattcctgggatgccgactgtg
attccacctggactgacccgtgatcaggagcgtgcttatatcgtgcaacttcagattgaa
gacctgacccgcaaactgcgtactggagaccttggtatccccccaaaccctgaggacagg
tccccctcacctgagccaatctacaacagcgagggcaagaggctcaacacccgagagttc
agaactcggaagaagctggaagaggagaggcacaacctcattcaggagatgattgccctc
aaccctgacttcaagccgccagcagattacaagccaccggccacacgtgtgagtgacaag
gtgatgatcccgcaggatgaatacccagagatcaattttgtcggcctgctaattggaccc
agaggcaatacattgaagaatatcgagaaagaatgcaatgccaaaatcatgatccgaggg
aaaggctcagtgaaggagggcaaggttggccggaaagatggacagatgctgccaggggaa
gatgagccactgcacgctctggtcacagcaaacacgatggagaatgtgaagaaggcagta
gagcagatccgaggtatcctaaagcaaggtattgaaaccccggaggatcagaatgacctg
cggaagatgcagctgagagagttggcccgcctcaacggcactctccgggaagatgacaac
aggatactgagaccttggcagagcacggagcccaggagcatcaccaacacaacgctgtgt
acgaagtgtggtggggcaggccacattgcttctgactgcaaattctccaggccaggagac
ccacagtctgctcaagacaaggcacgaatggacaaggagtatttgtcgctgatggccgag
ctaggagaggctccggtgccagcatcatcgtcttcacatacgagctccgcacagccgagt
gtcccacggacttctgggccagccagcagtcagcagcaacttccaaataggcctccgtgg
atgaactctggtccctcagacgccaacagaccctaccacgggatgcatggtgggccgcac
ccgggtttcccccctcctatgcccagcatgggtgggcatccgctgtcccacaatcccaat
gggcctccacctccatggatgcagccaccgccacctccgatgagccagggtcaccatcct
gtgcatccccccatgaacatgatgcaccacccaatgggcatgttgccgccaccaccccca
cctccagccagccagcctccacccccacccagtggccccatcccaccctggcaacaacag
caggcccagcagcagcagcaacagcagccaccaccaccacccagcagcagtatggcctcc
agtgcacccttaccctggcaacagagtggagcttcaagcgagggggccgcaaggaggatt
aagagggggcctgtctcttcccaactccctccccaaatcgcaggacttgcaatggaacct
ctgctttccagaagatggacagtgaaggggggctattaa
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