KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122543987
Entry
122543987         CDS       T08871                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1-like
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122543987
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpla03041]
    122543987
   04121 Ubiquitin system [BR:cpla04121]
    122543987
Spliceosome [BR:cpla03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    122543987
Ubiquitin system [BR:cpla04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122543987
SSDB
Motif
Pfam: SART-1 HIND HA
Other DBs
NCBI-GeneID: 122543987
NCBI-ProteinID: XP_043538931
LinkDB
Position
45
AA seq 642 aa
IVGVGGCGQRLGFCCVASNPLQTFPLFLPSAPGTKSGGASASLSIEETNKLRAKLGLKPL
EVNDSKKTEAGTKEDPVVVPAINPIAMKQQEDIRVKLAALKEKRLLNQKLGKVKSLGDDD
GWLDDAVAWVEKSRKLQREKEMAEKRAKLLEEMDEEFGISDLIEEEMQTKRQSAYTSRDL
KGLTVQHDIEAFTEGQSVVLTLKDKGVLDEEDDVLVNVNILDKERADKNVEHKKKKPDYK
PYEEEESVDDMAVFKGKSILSKYDEEIDGEKKKSFKLEAGGTADGSWEKELQQIRETLRS
QAQTLDTPQLKLASEFYTEEEMVTFKKTKRRVKKIRKKETKLKADDLLVQGHESTVTDYG
SRGRGRGWKFHGGEEAEGNTEQAEAAAPEVQTVSDDMRVENMDISDDEARAPDSPVAIEE
DEAEMELQKQLEKQRRLRQLHKQASDKVRPEPLLSERGCTISKAPRKCSGISLRGKLLRK
MSSSDTPLGTVALLQEKQKAQKTPYIVLSGSGKSMNVYWSRLIDDKYSRREEYRGFTQEF
KEKEAYRPDVKIDYVDESGRRLTPKEAFRQLSHRFHGKGSGKMKTEKRMKKLEEEHLLRK
MSSSDTPLGTVALLQEKQKAQKTPYIVLSGSGKSMNVNTITK
NT seq 1929 nt   +upstreamnt  +downstreamnt
attgtgggtgtaggtggttgtggtcagcgattgggattttgctgtgtagccagtaaccct
cttcaaaccttcccgttgttcttaccttcagctcctggaaccaagtccggtggtgcgagc
gcctcactgagcatcgaagagacgaacaagctgagagccaaactcgggctcaaacccctg
gaagtaaatgactcgaaaaagactgaggccggaacgaaagaggacccagttgtggtccca
gccattaaccccatcgccatgaagcagcaggaggacattcgggtgaaacttgctgccctg
aaggagaaacgcctcctgaatcagaagctggggaaagtgaaatctctcggcgatgatgat
ggctggctcgatgatgctgtggcctgggtggagaagagcaggaaactgcagagggagaag
gagatggccgagaagagggccaagcttctggaggaaatggatgaagagtttggcatcagc
gacctcatcgaggaggagatgcaaacgaagagacagtctgcctacacgtcccgggacctg
aagggactgacggtgcaacatgatatcgaggccttcacagaaggacagtcagtggtgctc
accctgaaggacaaaggggtcctggatgaggaggacgacgtcctcgtcaacgttaacatc
ctggataaggagcgagccgacaagaacgtggagcacaagaagaagaaacccgactacaag
ccctacgaggaggaggagagcgtggacgacatggcagtgtttaaggggaagtccatcctg
tctaagtacgacgaggagattgatggtgagaagaagaagtcatttaagctggaggccgga
gggaccgccgacggatcgtgggaaaaggagctgcagcagatccgggagacgctccggagc
caggcgcagaccctcgacacgccgcagctgaagctggcttcggaattctacaccgaggag
gagatggttacgttcaagaaaacgaagaggagagtgaagaagatacggaagaaggaaaca
aagctgaaagcagacgacctgctcgtccaggggcacgagagcacggtcaccgactacggc
tccagggggcgtggccgaggttggaagttccacggcggggaggaggcagaaggcaacaca
gagcaagcagaggcagccgccccagaggtacagactgtatcggacgacatgcgtgtggaa
aacatggacatcagtgacgatgaagcccgagcccctgactccccggtggccatcgaggag
gacgaggccgagatggagctgcagaaacagctggaaaagcagcgacgcctaaggcagctc
cacaaacaggcgtctgacaaggtgaggccggaaccattgctgtcagagaggggctgtacc
atctccaaagctccgagaaagtgttctgggatctccctgaggggaaagctgctgagaaag
atgagttcgagtgacacaccgctgggaaccgtggccctcctgcaggagaagcagaaagca
cagaaaacaccttacatcgtcctcagtgggagcgggaagagcatgaacgtgtactggtcc
aggttaatagatgacaagtacagtcggagagaggaatatcgcggcttcacgcaggagttc
aaggagaaggaagcttaccggcccgatgtgaagattgattacgtggacgaatctggaagg
aggctgaccccgaaagaggcattcagacagttgtcccaccggttccacggaaaaggatca
ggaaaaatgaagacggagaaacgcatgaagaaactcgaagaggaacatctgctgagaaag
atgagttcgagtgacacaccgctgggaaccgtggccctcctgcaggagaagcagaaagca
cagaaaacaccttacatcgtcctcagtgggagcgggaagagcatgaacgtaaacaccata
acgaaatga

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