Chiloscyllium plagiosum (whitespotted bambooshark): 122543994
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Entry
122543994 CDS
T08871
Symbol
vps51
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122543994 (vps51)
Membrane trafficking [BR:
cpla04131
]
Protein recycling
Others
EARP complex
122543994 (vps51)
Endosome - Golgi transport
Tethering complex
GARP complex
122543994 (vps51)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec5
VPS51_Exo84_N
Dor1
Vps54_N
EXOC6_Sec15_N
Vps53_N
YxiJ
COG5_N
DUF6290
TMTC_DUF1736
Fib_alpha
COG2_N
Sec8_N
COG4_N
Occludin_ELL
GIT_CC
DUF1908
GST_C_2
Motif
Other DBs
NCBI-GeneID:
122543994
NCBI-ProteinID:
XP_043538938
LinkDB
All DBs
Position
45:complement(5547147..5569971)
Genome browser
AA seq
734 aa
AA seq
DB search
MLCFFFFGCFRSRSFGSPALRKECTLAELMESEAEMVKHIRALDSDMQTLVYENYNKFIS
ATDTIRKMKNDFKKMEDEMDCLATNMAAITEFSARISHTLQDQHQQITKLSGVHTLLRKL
QFLFELPARLNKCIELEAYGQAVRYYSKARSVLHQYQHMASFHGIQNDCQKIISDLAQKL
REKFRDTGSSAKELAECVELLLQLGEPAEELCDEFLAHARSRLEEDLSALEAELGQQPGP
LSAASPPLSDILEFTDKGCNGFVGDTCLVIASYQDLFVHRPAAGGLVSSDVAQMAGAKLV
EFVDGLMGRYFGLVERRIRAEKGVGDSSLLVRGLDRFHRRLQAVVKLLPGSRTAAAEGTE
IVVRAAQERLRQYLQALQSFYADCLTDVRQSLAAPRLLGKDGANLAELLASVSASILNQV
KSVLAYVHLFTAKDVTFSSKAYFKGEFCSQGVREGLIVSFIRYMCHTARQFCETVGEKGA
TPPGLLLLLSRLCLDYEMSTISYILTLTDEQFLGQDHSPVTLVTVLCADAREAAQKLLNH
YVKVQGLNVSQMLRKSVETRDWLNTIEPRNVRAVMKRVVEDITSIDVQVGRQRATGGVHG
DIQVCHEPIQLLLCLCRCSAPMDTNLLSNIQKLFSERIDIFSPVEFNKVSVLTGIIKISL
KTFLECVRLRSFGRYGLQQIQVDCQYLQLYLWRFVSDENLVHFLLDEIVASTAHRCLDPV
TMEQSVIEVICERG
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgctctgtttcttcttttttggctgtttcagatctcgatcgtttggaagtcctgcgctc
aggaaggaatgcacactggcagaactgatggaaagtgaggctgagatggtaaaacacatc
cgagctctcgacagcgacatgcagactctggtctacgaaaactacaacaagtttatctca
gcaacagacaccatcaggaaaatgaagaacgacttcaagaagatggaggatgagatggat
tgcctggcgaccaacatggccgccatcacggaattcagcgcccgcatcagtcacacactg
caggaccagcatcagcagatcaccaaactctcaggtgtgcacacgttactgaggaagctg
cagttcctgtttgagctaccagcccggctgaacaagtgcatcgagctcgaggcatacggc
caggccgtgaggtattacagcaaggcccgctcggtgctgcaccagtaccagcacatggcg
tctttccacggcatccagaacgactgccagaagatcatatctgacttggcacagaaactc
cgggagaagttcagagacaccggctcgagcgccaaggagctggcggagtgtgtggagctg
ttactgcagttgggtgagccggcggaggagctgtgcgatgagttcctagcccacgcccgc
tcccggctggaggaggacctgtcggcgctggaggctgagctgggtcagcagccaggcccc
ctctctgcggcctcgcctcccctctccgacatcctggagttcaccgacaagggctgcaac
ggctttgtgggggacacctgccttgtcatcgcctcctaccaggacctgtttgtccaccgg
ccggcggccggaggcctggtcagctcggacgtggcgcaaatggccggcgccaagctggtg
gagtttgtcgacgggctgatgggccgttactttggcctggtggagcggcgcatccgggcg
gagaaaggggtgggggacagctcgctgctggtgcgcggtctggaccgcttccaccggcgc
ctgcaggccgtggtcaagctgctgcccggctcgaggacggcggccgccgagggcacagag
atcgtggtgcgtgctgcccaggagcggctccgccagtacctgcaggccctgcagagcttc
tacgctgactgcctgactgatgtgcgccagtcgctggccgccccgcggctcctgggcaag
gacggcgccaacttggccgagctcctggcctctgtctccgcctccatcctcaaccaggtc
aagtcggtgctggcctacgtccacctgttcaccgccaaggacgtcaccttctccagcaag
gcctacttcaagggggagttctgcagccagggcgtccgcgaggggctcatcgtcagcttc
atcaggtacatgtgccacacggcacgccagttctgcgagacggtgggtgagaagggcgcc
acccccccgggcctgctcctgctgctgtcccgcctctgcctggactacgagatgtccacc
atcagctacatcctgaccctgaccgacgagcagtttctggggcaggaccattccccggtg
accctggtgacggtgctgtgtgccgacgcacgggaggctgctcagaagctgctgaaccac
tacgtgaaggtgcagggcctgaacgtgtcgcagatgctgcgcaagagcgtggagacccgg
gactggctcaacaccatcgagccgcggaacgtgcgtgccgtgatgaagagggtggtggag
gacatcacttccatcgacgtgcaggtcgggaggcagagggcaactgggggagtgcatggg
gatatccaggtttgtcacgagcccattcagctcctgttatgtctttgccgctgcagcgct
ccgatggacaccaacctcctgagtaacatccagaagctcttctccgagcggatagacatc
ttcagccccgtcgagttcaacaaggtctccgtgctgacagggatcatcaagatcagcctg
aagaccttcctggagtgcgtgaggctgcgctcgttcggccgctacgggctgcagcagatc
caggtggactgccagtacctgcagctctacctgtggcgctttgtctccgacgagaacctg
gtgcacttcctgctggacgagatcgtcgccagcaccgcccaccgctgcctggaccccgtc
accatggagcagagtgtcatcgaggtcatatgcgagaggggctga
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