KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122544063
Entry
122544063         CDS       T08871                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03082  ATP-dependent chromatin remodeling
cpla03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    122544063
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122544063
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cpla01009]
    122544063
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpla03021]
    122544063
   03036 Chromosome and associated proteins [BR:cpla03036]
    122544063
Protein phosphatases and associated proteins [BR:cpla01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     122544063
Transcription machinery [BR:cpla03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     122544063
    SWI/SNF complex
     122544063
Chromosome and associated proteins [BR:cpla03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    122544063
   PBAF complex
    122544063
   SWI/SNF complex
    122544063
SSDB
Motif
Pfam: INI1_DNA-bd SNF5
Other DBs
NCBI-GeneID: 122544063
NCBI-ProteinID: XP_043538993
LinkDB
Position
46:3223848..3232142
AA seq 222 aa
MAASKTFGLKPVKFQLEQASEWFMIGSEVGNYLRMFRGSLYKKYPSLWRRLATVEERKKI
VASSHDHGYTTLATNVTLLRATEVEEILEGNDEKYKAVSISTEPPTYLREPKSKRNNQWV
PTLPNSSHHLDAVPCSTSINRNRMGRDKKRVFPLCFDDHDPAVIHENAAQPELLVPIRLD
MEIDGQKLRDTFTWNMNGNGTTVPALSGPAQGGTGLPSNIHI
NT seq 669 nt   +upstreamnt  +downstreamnt
atggcggccagtaaaacatttggattgaaacctgtgaaattccagctggaacaagcaagc
gagtggttcatgattggatcggaggtgggaaattacctgcgcatgttccggggctcgctg
tacaagaagtatccgtccctctggagacgcctggccactgtcgaagagaggaagaagatt
gttgcttcgtcacacgatcatggctacaccactctggccacaaacgttaccctgctacgt
gcgacggaggtggaagagattctggaaggcaacgatgagaagtataaggctgtctccatc
agcaccgagcctccgacgtacctccgggaaccaaagtcgaagagaaataaccaatgggtt
cccaccctacccaacagttcacaccacttggacgcagtgccctgttcaacctctatcaac
agaaaccgcatgggacgggacaagaagagggtgttccccctctgttttgatgaccacgat
cctgcggttatccatgagaacgccgcccagcctgagctcctggtgccgatccggttggac
atggagatcgatgggcagaagctgcgggacaccttcacctggaacatgaatggtaatggg
actacagtcccagctctgtctgggccagcacagggtgggacaggccttcccagcaacatt
cacatataa

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