Chiloscyllium plagiosum (whitespotted bambooshark): 122544251
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Entry
122544251 CDS
T08871
Symbol
med23
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpla03021
]
122544251 (med23)
Transcription machinery [BR:
cpla03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
122544251 (med23)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
122544251
NCBI-ProteinID:
XP_043539266
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All DBs
Position
3:64069866..64191106
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AA seq
1379 aa
AA seq
DB search
MAVSMETQLQSIFEEVVKTEVIEEAFAGMFMDTAEDEKTKLISCLGAFRQLWTNLPQESH
EQCVQWIVRFIHGQHNPKRISFLYDCLAMAVESGLLPPRLVCESLINSESLEWERMQLWA
LTFKLIRKIIGGVDYKGVRDLLKAILEKIQTIPNTVSSAVVQQLQTAKDVVAYILDRNAC
LLPAYFAVTEIRKLYPEGKLSHWLLGNLASDFVDSFRPTARINSICGRCSLLPVVNNSGA
ICNSWKLDPTTLRFPLRGLLPYDKDLFDPQTALLRYVLEQPYSRDMVCNMLGLNKQTLNI
AQHKQRCPVLEDQLVDLVVYAMERSETEEKFDDGGTSQLLWQHLSSQLIFFVLFQFASFP
HMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKECIP
VPDISKPQSTHAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLKLHHEFLQQSLRNKSLQMN
DYKIALLCNAYSTNSECFTLPMGVLVETIYGNGSLRISLPGTNCTASGSITPLPMNLLDS
LTVHAKMSLIHSIATRVIKLAHAKSSLALAPALVETYSRLLVYMEIESLGIKGFISQLLP
NVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQNQLHLCVESTAL
RLITALGSSEVQPQFTRFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSESIQGT
WCKDILQTIMVFTPHNWASHTLSCFPAPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSM
TNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFADFL
VYEFSTSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLALRSHEGNEAQVCYFIIQLLL
LKPNDFRNRVSDFVKENSPEHWLQHDWHTKHMNYHKKYPEKLYFEGLAEQVNPPVQIQPQ
YLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLH
YYERHLRDRTNLKRKLVHAVIGSLKDNRLQGWCLSETYLKSAMNAREDNPWVPDDTYYCK
LIGRLVETMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALSVPGKEVGNALLNVV
LKSQPLVPRENITAWMNAIGLVITALPEPYWIVLNDRIVNVINSATLTSDTEWVGYPFQL
FDFTACHQSYCEMYCSYVLALAHAVWHHSSIGQLSLIPKFLSEVLKPLVKTEFQLLYIYH
LVGPFLQRFQQERTRCMLEIGIAFYEMLQNVDQNTQHLSYMDPICDFLYHVKYMFTGDSV
KDQVEKIICMLRPALKLRLRFVTHISKVEPAGAVQPASNASPANPSSQVSTGVTLSVTQ
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttctatggagacccagctccagagcatcttcgaggaggtggtgaaaactgaa
gtaatcgaggaagcctttgctggtatgtttatggacacagccgaagatgagaaaaccaag
ttgattagttgccttggagctttcaggcaactttggacaaatcttcctcaggaatcccat
gagcagtgtgtgcagtggattgttcgcttcatccatggacagcacaaccccaagaggatt
tcgtttctgtatgactgcttggctatggcagttgaaagtgggttgctgcctccaagactg
gtctgcgagtctttaattaactctgaaagtctggaatgggagagaatgcaactttgggct
ctaacgtttaaactaattcgaaaaataataggtggtgttgactacaagggtgtaagagac
ctgttaaaagcaattctagagaagattcaaactattcctaacacagtcagttctgctgtt
gtacagcaactacaaacagctaaagatgttgtggcatacatcttggacagaaatgcttgt
ctgttaccagcatattttgcagttactgagattagaaagctttatcctgaagggaaatta
tctcattggttactaggaaatcttgcatctgattttgtagacagctttcgacctactgca
cgaataaactcaatctgtggacgctgtagtcttttgccagtggtgaacaattctggtgca
atttgtaattcttggaagctggatccaacaacacttcgctttcctctgagagggctcttg
ccttatgacaaggatctttttgacccacagactgctctgttgagatatgttttagaacaa
ccttactccagggatatggtctgcaacatgctaggtctgaacaagcagaccttgaacatt
gctcagcacaaacagcgctgtccagttttggaagatcagcttgtggatttagtggtttat
gctatggaacgctctgaaacagaagaaaagtttgatgatggaggcaccagtcagttattg
tggcaacacctctcgagtcagctcattttctttgtcttatttcaatttgctagttttcca
cacatggtgttatcacttcatcagaagctggcaggccgaggtctaataaaagggcgagac
catctgatgtgggttttgttgcagttcatctctgggagtatccagaagaatgcattagct
gatttcctcccagtaatgaagctgtttgatctgctgtatccagagaaagaatgcattcct
gtacctgacataagcaaaccacagtctactcatgcgtttgccatgacttgtatctggatt
catctcaataggaaggcacaaaatgataactctaaactgcagatacccatccctcattct
ctcaagctccaccatgaatttttacaacaaagtttgagaaacaagagtctacagatgaac
gattacaagattgccttgctgtgtaatgcatattctactaattctgaatgttttacatta
cctatgggagtattggttgaaacaatatatgggaatggcagcttgaggatatcccttcct
ggaacaaactgcacggcttcaggatctattaccccgctaccaatgaacttattagattca
ctaaccgttcatgccaaaatgagcctcattcacagtatagctacaagagtgatcaaacta
gcccatgccaaatcaagcctagctttggctcctgcgctggtagaaacttatagccgtctt
ctagtttatatggagattgaatctcttggaattaaaggttttatcagccagcttttacca
aatgttttcaaatcacacgcttggggaatcctacacactctgctggagatgttcagctat
cgcatgcatcatatccagcctcactacagagtccagctgttaagccatctccattcattg
gcagctgtaccacagactaatcagaatcaacttcacttgtgcgttgaaagcacagctctt
cggttgatcaccgctttgggcagttcagaagtgcagccccaatttacacggtttctcagt
gaccccaaaacagttctttctgctgaatctgaggaacttaacagagctctaattctaact
ctagcaagagcaacccatgtaactgacttttttacaggctccgaatctatacaaggtacc
tggtgtaaagacatccttcaaacaatcatggttttcactcctcacaactgggcttcacac
acactcagctgtttcccggctccattgcaggccttttttaaacagaacaatgtgcctcag
gaaagtcgttttaatttaaagaagaatgtggaagaagaatatagaaaatggaaatcaatg
accaacgagaacgatattatcacgcacttctctatgcaggggtctccaccactcttcctc
tgtctgctctggaaaatgttgttagagactgatcacattaatcagattggctacagagtg
ttagagagaataggagctcgagctttggtagctcatgttcgaacatttgctgacttcctc
gtctatgagttctcaacttctgctggaggacaacaattgaataaatgcatagagatcctt
aatgacatggtgtggaaatataacatcgtcaccttggacagattgatattatgcctggct
ttgcgaagtcatgaaggaaatgaggcccaagtctgttacttcattattcagctgttgctg
ttaaagccaaatgattttaggaaccgagtgagtgactttgtgaaggaaaattctccagag
cattggctccaacatgactggcatacaaaacacatgaactatcataagaaatatcctgaa
aagctgtattttgagggcctggctgaacaggttaatccccccgtgcagattcagcctcaa
tatctccctatttattttggaaatgtctgccttcggtttttgccagtgtttgatattgta
atccacagatttttagaattactcccagtttcaaaatctttggaaacacttcttgatcac
ctcggaggcctgtataaatttcatgaccgacctgtcacctacctatacaacacacttcat
tactatgagagacatctgcgggatcgcacaaatcttaaacgcaagcttgttcatgcagtc
attggctctctaaaagataaccgactacaaggctggtgtttaagtgaaacttacctgaaa
tctgccatgaatgcacgagaagacaatccgtgggttcctgatgacacgtactactgcaag
ttaattggtcgattggtggagactatggcaggtaaatcgcctggtccatttccaaactgt
gactggagattcaatgaatttccaaacccggcagcacatgcccttcatgtaacctgtgtg
gaacttatggcattatctgttccggggaaagaagttggaaatgcacttcttaacgttgta
cttaagagtcaaccattggtaccgagagaaaacattactgcctggatgaatgcaattgga
cttgtaataactgcattgcctgaaccctactggatagtactgaatgatcgcattgtgaat
gtcatcaacagtgcaacattaacctcggatacagaatgggtaggatacccatttcagcta
tttgatttcacagcttgccaccagtcttattgtgagatgtactgtagctatgttctggcc
ttggcgcatgcagtgtggcatcattcaagtattggacagctttctcttatccccaaattt
ctctcagaagtactaaagccattggtgaagactgaattccagttgttgtacatttatcat
cttgttggtccttttctacaacgattccagcaagaaaggacccgatgtatgcttgagatt
ggaattgcattttatgagatgttacagaatgtagaccaaaacacacagcatctgagctat
atggaccctatttgtgattttctataccatgtaaagtacatgtttacaggagacagtgtt
aaagatcaggtggaaaaaataatctgtatgctaaggccagctttaaaacttcgactgcga
tttgtgactcacattagtaaggtggagccagcaggagcagtgcaaccagcaagcaacgcc
tctccagccaacccttccagccaggtgtccactggtgtcaccttgtcagtaacacaataa
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