Chiloscyllium plagiosum (whitespotted bambooshark): 122544337
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Entry
122544337 CDS
T08871
Name
(RefSeq) GRB10-interacting GYF protein 2-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122544337
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122544337
Surveillance factors
Other surveillance factors
122544337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
122544337
NCBI-ProteinID:
XP_043539456
LinkDB
All DBs
Position
48:4943266..5045456
Genome browser
AA seq
1232 aa
AA seq
DB search
MAAETQTLNFGPEWLRALSSGGSIASPPPSPALPKYKLADYRYGREEMLALYMKDNKVPE
ELSDKEFLAVLQDEPLLPLALVPLTEEEQRNFSMSVNSSAVMRLMGRGGGAPSAGVVRGR
GSARGRGRGRGESGYYQRSFEDGEGGFGRGAREMLRSQSWEERGDRRFEKPGRRDGVRVG
FEEVAPTSRKQDFARSDSENWRAIREEQNGEEEDGGWRTAGARREGERWRPPSPDGPRSA
GWRDHADRRRRFDFDFRERDEERTYRRGRTGSGSYEDEKDNLPEWCLEDAEEEMGTFDSS
GAFMSLKKGSKEPIPEEQELEFRGVDELDERPENEYDMEFYKEPDRTENEDAADKTDLPA
EIYNGKVSPSCSSSSPSESQAQEVFLAVPEECEPTVHRAEPDMSDSASDAQGQSKPADEA
VNLGQPAQLSPATVSTLSSSSPSSSPPYPSTVAEFAPVDNDDDDGMKRFEQEAEKMVASL
HDNSLDDERFVEMMQDQRNRAAAALPLSHEAAMKWFYKDPQGEIQGPFTTQEMADWFQAG
YFPMSLLVKRGCDEGFQPLGDVIKMWGRVPFAPGPSPPPLLGDMDQGRLKKQRELAAALY
HQLQYQQFLQLINSRQQLVQCALQQKANMTPQQQQQLVVFLQQIQALKSRCAEQNLIPAI
NRSMSVPETGSLWDLPTSASQPSGCDTGSLWDSASQGPLLEQIQKLEREKATKLKQERRD
VELRNKREEDDRKRQDEIRWQEEERKRRDEDELTRRKQEEVVRFQREQQEEAARRQREEE
DRRQEEALRRRDEEERRQMEDILRKQEKDRRQQDETRRWLEEEESRRQLEEEARRRLAEE
EERKRKEMDLQLQRQQEMLRHRQQQEALRRLQQQQQLAHIKIPSSTSWGQQSNSVPPLQK
LEEERERHRREEQCRQQQEIMKALQQHQQQKSPGWNNLPKQSMSVKSLLEMQQELQKQQQ
QRAQARAHSSMPMNNSSVWGLPGQWGSDMNSMWSMHENKNSNMSLWGDEAVKSTGPVIRS
AGLKNSRSSPSLSDSYGIPSRPSKKKTEDEEKLLKLFQGMNKTQDGFTQWCEQMLHVLNT
ANNLDVPTFVSFLKEVDSPYEVHDYIRAYLGDTPEAKEFAKQFLERRAKQKANQQRQQQQ
QLTKELLSLTGNLALQPDRLQDSIWGIGSNSLQSLFQGNHNSAQQSSYESSQAGKKKKKQ
KMVRADPSILGFSVNASSERLNMGEIETLDDF
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagagactcagacgctcaactttggacctgaatggcttcgtgcattgtccagt
ggtggaagcattgcatccccacctccttcacctgcattgccaaaatacaaattagcagat
tatcgatatgggagagaggaaatgctagcactttatatgaaagataacaaggttcctgaa
gagctgtcggacaaagaatttctggctgtcttacaagatgagccgcttctgcccttagca
cttgtacctcttacagaggaagagcagagaaatttttctatgtctgtgaacagctctgca
gtgatgaggttgatggggcggggaggaggagccccatcggcaggggttgtcagaggccga
ggcagtgcaagaggccgaggtcgaggaaggggtgaaagtggttactaccaaagaagtttc
gaagacggtgaaggaggttttggccgtggggcacgtgaaatgctgcgaagtcaaagttgg
gaagaaaggggtgacagaagatttgagaagcctgggcgtcgagatggagtacgggtaggg
tttgaggaagtagctcccacgtcacgcaaacaggattttgcacgttctgacagcgagaac
tggcgagccattcgagaagaacaaaacggtgaagaggaagacggaggctggaggacagcc
ggagcaagaagagaaggcgagaggtggcggcccccaagtccagatggtcctcgctcggca
ggctggagggaccatgctgatcggcggcgaaggtttgactttgacttccgggagcgagat
gaggagcgtacctacagaaggggaaggactggtagtggaagctacgaggatgagaaggat
aatttacctgagtggtgcctagaagatgcagaagaggaaatggggacgtttgattcatct
ggggctttcatgtcattaaagaaaggttccaaagaaccaattcctgaagagcaggaactt
gaatttcgaggagtagatgaattggatgaacgaccagaaaatgaatatgatatggaattc
tataaagaacctgatagaacagaaaacgaggatgcagcagacaagaccgatctaccagct
gagatttacaatggcaaagtctcgccatcgtgctcatcatcctctccctcagagtcacag
gcccaggaagtgtttctcgcagtaccagaagagtgtgaacccactgtgcacagggcagaa
cctgatatgtcagactctgcatcagatgctcagggacagagcaaacctgccgatgaagct
gtgaatctgggccaacctgctcagctaagccctgcaacagtgtccacattatcctcgtcc
tcgccttcttcctctcctccctatcccagcaccgttgccgaattcgcaccagtggacaac
gatgacgacgatgggatgaaacgttttgaacaggaggctgagaaaatggtggcatcacta
catgacaattcactggatgatgaacgatttgtggagatgatgcaagatcagaggaaccga
gctgctgctgccttacccctctctcatgaggcagccatgaaatggttctacaaggatcca
cagggagagatccaaggtccgtttacaacgcaggaaatggctgactggttccaagctgga
tattttcccatgtccctcttggttaaacggggttgtgatgagggcttccagccgctgggg
gatgtgattaagatgtggggaagagtgccttttgctcctggtccctctcctcctccgttg
ctgggcgatatggaccaggggagactgaaaaagcagcgggagttggcagctgccttgtat
catcagcttcaataccagcaatttctgcaactcataaacagccggcagcagcttgtacag
tgtgcgctacagcagaaggcaaacatgacgccccagcaacaacagcaacttgtggtgttc
ctgcagcagatccaggccctcaaatcaaggtgtgcagagcaaaatttgattcctgctatc
aacagatccatgtctgtgcccgaaactgggtctctttgggaccttccgacctctgcttca
cagccctcaggttgtgatacaggaagcttgtgggattcagcatctcagggtccactgctg
gaacaaattcaaaaactagagcgagagaaagctacaaaactaaagcaggagcgaagagac
gttgaactcaggaataaaagggaagaggatgacagaaaacgacaggatgaaatccggtgg
caagaggaagaacgcaaacgtcgggatgaggatgagttaactaggaggaagcaggaagag
gtagttcgatttcagagagagcagcaggaagaggctgcccggcgccaaagagaggaggag
gatcgccgacaagaggaggccctgaggcgacgcgatgaggaggaaaggcggcagatggag
gacatcctccggaagcaggagaaagataggcggcagcaggatgaaacccgccggtggctg
gaggaagaggagagcaggcgccagctggaggaggaagccaggcgcaggcttgctgaggag
gaggaacggaaacgcaaggagatggatctgcagcttcagcggcagcaagagatgctgcga
cacaggcagcagcaagaggcactgaggcgcttacagcagcagcagcagttagcacatata
aagatcccctcttccacttcatggggacagcagtccaactcggtaccaccacttcagaag
ctggaggaggaaagggagcgacaccgcagggaggagcaatgtcgtcagcaacaggagata
atgaaggcccttcaacagcaccagcagcagaagtcacctggctggaacaatcttcccaag
cagtcgatgtctgtcaagtcattactggaaatgcagcaagagctgcagaaacagcaacag
cagagagcgcaggcacgagcacattccagtatgcctatgaacaactcatcggtgtgggga
ttgcctggccagtgggggtctgatatgaacagcatgtggagcatgcatgaaaataagaac
tctaacatgagcctttggggtgatgaagctgtgaagagcacaggccctgtgattagaagt
gctggactgaagaacagcaggagtagcccctcgctcagtgactcgtatggaattccttcc
agaccgagcaaaaagaaaactgaggacgaggagaagttactgaagctgttccagggaatg
aacaaaactcaggacggtttcactcagtggtgtgagcaaatgctgcatgtccttaataca
gccaataatcttgatgtccccacgtttgtatccttccttaaagaagtggactcgccgtat
gaggtgcatgattacatccgtgcttacctgggtgacaccccggaggccaaagagtttgcc
aagcagttcctggagcgtcgtgccaaacaaaaggctaaccagcaaaggcaacaacagcaa
cagttaacaaaggaacttttaagcctcactgggaacctcgctctgcagcctgacaggtta
caggactccatctggggaatcggttcaaacagcctacagtcactcttccagggtaatcac
aacagtgcacagcagtcgtcttacgagagctctcaagctgggaaaaagaaaaagaagcaa
aagatggtgcgggctgatcctagtatcctgggcttttctgtgaacgcatcgtcggagcga
ctgaacatgggagaaatagagacattggatgacttttaa
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