Chiloscyllium plagiosum (whitespotted bambooshark): 122544385
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Entry
122544385 CDS
T08871
Symbol
pelp1
Name
(RefSeq) proline-, glutamic acid- and leucine-rich protein 1
KO
K16913
proline-, glutamic acid- and leucine-rich protein 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpla03009
]
122544385 (pelp1)
Ribosome biogenesis [BR:
cpla03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
122544385 (pelp1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PELP1_HEAT
RIX1
Motif
Other DBs
NCBI-GeneID:
122544385
NCBI-ProteinID:
XP_043539565
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Position
48:complement(3739105..3772161)
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AA seq
1103 aa
AA seq
DB search
MDKLDTNSSDLSGLISISNSSLRSVKSRFEGVCLLAVLVADSPTDTFQDQCISWLRAVQH
IIQSQDPQTTTELAIWVLHDLLKYSSQLLELAREVAMNHVPAIVTALLALKPECHGAALE
GMKACMTFYPRACGSLRGKLAAYFLSKLDTGSPHMHELACQCYVLLPGLGAGFAQGMKYV
ESWAQQLHYLLATLHGLVKQLYEGAETDPVCYEGPGVMLPLPELNDGDPFHVLQLRQRFS
ALSKCLSLLLSSDFPVPVKLPVQDVLNLVCRILNISTKNMSWIGDGPLKMLVLPAIHCDA
LEILSAVITVSRKHLVRFSDIICRLFPQVLTAWSTPRESAVPGQERAYSSVRVKAYEVLG
TWLKVCGASSGVLQGPFHHCDVLLANLIADVTPVVDTTKLRPSKPAGDGSQPFNYGKPSA
KRQKLMDLEDAAAVPGHRKRDPTANGDVCLAALKVCSDVILSCGSLLKEETHKKLHELVV
PLLLRLQQNSSMTSPYLRADCRRELYRLLLFLLLVPNSKWPPPLHCAVRMFSQGQNDRNT
EVSSFCSEALVICNCLIHPRVPSLQMPLSAASLIATAFKPTPSADPQAPARPPQVPTFHL
PAPPPPSHPPPPGAGPRALTDHAPPARFSLPPPARFPSPAESHRGMGQEGIPTAAPGEEA
IFGGDANCSRPVFIRYDKEEESDVEISLDSDSDDSVVIVPEGLLPDRGAPAAMGGTGPSA
AGPPSSSSSSPPAPPPAPATPADAKRRRKEEEGPGEEAPEEIEKVVVASPRAQGAQAPTP
LPIPTPQPQEPGGTGEARPASQEPDEELTVININSSEDEEGEEDYLEEEEEEEEDYYDEE
EEEEEEEEEEDYEDEEEDFEEEGELEEDEMDEEMEDEDEEDEEEEGEVEMYRPRGPGDTS
EEEPALAPRPAELPAAPPQEGEGPGPPEPHPEGMPSPRRSEGEGSPGGRAQGAPAQSQPL
PPPLGESEEGARPEMLRSTPPLPGERADGGDSQPPSAGGGGASSPGEEGAPTLQKEEGGD
GVADAVEAPPQGEVEEEGMMEAEPAEQHRREEEEEVEPAEKPAPETEEPEDQAAAMLADF
VDCPPDEEEVKDMAAGATSSSST
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggacaagctggacacgaattcatcggatctgagcggcttgatcagtatcagcaactcc
agtctccggtcggtcaaaagcaggtttgaaggagtttgcttgctggccgtgctggtggct
gacagtcccacggataccttccaggatcagtgcatctcctggctccgagctgtgcagcac
attatccagtcccaggacccccagacgacgacagagctggccatctgggtgctccatgac
ctgctgaagtactcctcccagctcctggaactggcccgggaagtggccatgaaccacgtt
ccagccattgtgactgctctcttggcactgaagcctgagtgtcacggagcagcgctagag
ggaatgaaggcctgtatgaccttttacccccgggcctgtggatctctgcggggcaagctt
gctgcttacttcctgagtaaacttgacactgggagcccacacatgcacgagctggcctgc
caatgctacgtgttgttgcctgggcttggagccgggtttgcccagggaatgaagtacgtg
gaatcttgggcacagcagctacactacctcctcgccaccttgcacggcctggtcaagcag
ttgtacgaaggggcagaaaccgacccagtttgttatgaaggcccaggagtcatgttgccc
ctgcctgagctgaacgatggagaccccttccacgtgctgcagctgaggcaacggttctct
gcgctgagcaagtgcctctcgctgctcctcagttcagatttcccggtgcctgtgaagctc
ccggtgcaggacgtcctgaatttggtctgtcggatcctgaacatcagcaccaagaacatg
agctggataggggatggaccattaaagatgttagtcctgccggcaatccattgcgacgcg
ctggaaattctctcggcagtcatcaccgtgagcaggaagcatttggtacgcttttccgac
atcatctgccggctcttcccgcaggtcctgactgcctggagcacaccccgggagtccgct
gtgcccgggcaggagagagcctacagctcagtgagagtcaaggcctacgaggtgctgggg
acgtggctgaaggtgtgcggggcatcctcgggggtcctgcaggggccgttccatcactgt
gacgtcctattggccaacctgattgctgacgtgaccccagtggtggacacgaccaagctc
cggcccagcaagccggcgggagatgggagccagccattcaactacggcaagccgagcgcc
aaaaggcagaagctgatggacctggaggatgctgcggccgtgccgggccacaggaagcgg
gaccccaccgccaacggcgacgtctgcctcgcagcgttgaaagtctgcagcgatgtgatc
ctatcctgtggaagcttgctgaaggaagagacccacaagaagctccatgagctggtggta
cccctcctgctccgactgcagcagaacagcagcatgaccagcccctatctccgggcggat
tgtcggcgggagctataccgtctcctgctcttcttgctgctggttcccaattccaaatgg
ccgccaccactgcactgcgccgtcagaatgttcagccaaggacagaacgaccgcaacact
gaggtctcgtcgttctgctcagaggctctggtcatctgcaactgtctcatccacccccgg
gtgccgtcgctgcagatgcccctcagtgctgccagcctcatcgccacggccttcaagccc
acgcccagcgccgatccgcaggcccccgccaggccaccgcaggtgcccaccttccacctg
cctgcccctccccctccgagtcacccccctccccccggggccgggccccgggctctgact
gaccacgccccgcctgctcgtttctccctcccaccgcccgcccgcttcccgtcaccagcg
gagagccaccgcggcatgggtcaggaggggatccccacggcggcccccggcgaggaggcc
atcttcgggggcgatgccaactgcagccgccctgtcttcattcgctatgacaaggaggag
gagtcggacgtggagatctccctggacagcgactctgacgacagcgtggtgattgttccc
gaggggctgctgcctgaccggggggcaccggcggcaatggggggcaccgggccgagtgcc
gcagggcccccctcatcgtcgtcgtcctcccctccggcgccgccaccagcccctgccacc
ccagccgacgccaagaggaggaggaaggaagaggaagggccgggcgaagaggcgccggag
gagatcgagaaagtggtggtggcctcgcctcgggcccagggagcccaggccccaaccccc
ctccccatccccacgccccagccccaagagccagggggcaccggcgaggcccggcctgcc
tcccaggagccggacgaagagctgacggtcatcaacatcaacagcagcgaagacgaggaa
ggggaggaggattacctggaggaggaggaggaggaagaggaggattactacgacgaggag
gaggaggaggaggaagaagaggaggaggaggactacgaggatgaagaggaggactttgag
gaggagggtgagctggaggaggacgagatggatgaggagatggaggatgaggacgaggaa
gatgaggaggaggaaggggaggtggagatgtacaggcccaggggcccgggggacacctct
gaagaggagcccgctctcgccccacggcctgcggagctcccggccgcgcctccacaggag
ggggaggggcctgggccaccagagccccaccccgaggggatgcccagcccccggcggagc
gagggggagggcagcccaggggggcgggcccagggagcccctgcccagagccaaccactg
ccgccgcctctgggtgagagcgaggagggagcgcgcccagagatgctgcggtccaccccc
cctctccccggggagcgagcggacggaggggactcccagcccccctctgctggaggggga
ggggcctcgagcccgggggaagagggcgccccgaccctgcagaaggaggaggggggagat
ggagtggccgacgcggtcgaggcacccccccagggggaggtggaggaggagggcatgatg
gaggctgagcctgcggagcagcatcggcgagaagaggaggaggaggtggaacccgctgag
aaacctgcccctgaaactgaggagccggaggaccaggcggcagccatgttggcggacttt
gtggattgtcctccggacgaggaggaggtgaaagatatggcagctggagccacgtccagt
agcagtacctga
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