Chiloscyllium plagiosum (whitespotted bambooshark): 122544408
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Entry
122544408 CDS
T08871
Name
(RefSeq) cohesin subunit SA-2-like
KO
K06671
cohesin complex subunit SA-1/2
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122544408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122544408
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
122544408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
ZSWIM1-3_RNaseH-like
INTS7_N
Motif
Other DBs
NCBI-GeneID:
122544408
NCBI-ProteinID:
XP_043539591
LinkDB
All DBs
Position
48:complement(6981362..7033308)
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AA seq
1426 aa
AA seq
DB search
MPVLRSRKASPGSEKGMSPVSVAGSVESRFSSPTYFRREEVAELLIGDNLDSDNVTSESE
SDTGSDFEDTLNKGRKQMASRPSRAPPAKRPKHTPVEKKVAPQKRNPGKQQKPSLVQQSI
SLAKDAPQSSRRSRQVLADSNQKVVKDAGTAWLDSDQETSNLSVSTTRSQSARQLSRSRR
VPAKSNPQTAGKENVSMHPSSDQETSNLSVSVRQLKSMAQSSRKVGHVSAAKAGQKSGVK
AAAPGQQKEASNLFEAVKLAKSAMQTLVDEWLEVYKLDRETGLLELLNFFIHSCGCKGII
TSQMFHKLQNAEIIRKMTEEFDEDSGDYPLSMAGPMWKKFRQNFCEFITVLVRQCQYNVI
YDEYMVDVLISLLTGLSDSQVRAFRHTSTLAAMKLMTALVDVALNLNGHQENIQRQYDTE
RNKAAGKRANDRLEMLLQKRKELQQNQEEIENMMNAIFKGVFVHRYRDLIAEIRAICMEE
IGVWMKRYSNSFLNDSYLKYVGWMLHDKQREVRLRCLKSLQNLYESKEITQKLDLFTNRF
KDRMVSMVLDVDYDVAVEAVRLLTLILQNTEDVLTHEECECVYPLVYASHRPTAAAAGQF
VHVKLRRHYDAEREKALAKDHGRRSVNGEFIKLVLTFFLESELHEHCAYLVDSLWDHAGS
VLKDWEGMTELLLEEIGDGEEGLTDQEESALIELMVCSMRQAVEGHPPIGRQSGKKFLTV
KEKKQQMDDRVKLSEHLIVIIPQLLAKYSADAEKVANLLLIPGFFDLDVYCSRRLEKYLD
LLLKQIREIVEKHTEMDVLEACSRAYYTLCNEEYTIRNRVDIARSQIVDTLVEIFTHSVE
ELLHEVGETDEDNLYTVATSLKRITALYNAHDLTRWELFDNCCRVLERGIDTGDVPEQII
VQALLCAHFHVLWTLAVISEYSATKEQIIRLRKQRNKVFIMCQHGLSNVSSRVREQSFIL
LCDLLVIFSSQMTRDGHDDLQPLVFTADLPLVSELLSFVMDHVFVELEEDGDDETLKIEM
LHKRRNFLAGFCKLVIYNMVDLRTAADIFKHYMKYYGDYGDIIKEMLAKARLIDKVECAK
TLLLSLQQLFNELVQDQGPVIDRSSVAFCTIKDLGRRFALTFGIDLIKSRQSVVSLHLDG
IRFAFQQYHPSASDLPPQNLLFLDVISEFSVKLLRQDKKAVLGYLDKTFPAPVNLSTQGW
LPLTLYRRSLLARGEDDTVSVISSRTLSARSKKAPTSSAKRRRLEVSDLSSDGVWLQSGG
SMPVGGKLRTPILTSTILRPPQWDTRSLQSSDDQDSEKGSESEFAQSRSWLESQSQNKRQ
NKRVQKDQQQKNRMRQRHKKQQLLSLMEEDGEESETGEMISDATSERSDANSEISLAPPI
RQGRAGLLQDLFDSSILDIDRLTPRWCGASSVLTDPSMVRRSFSAD
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgttgagatcgaggaaagccagccctggctctgagaaaggcatgtctccggtg
agcgttgctgggagtgtcgaatcacggttttccagcccaacctatttccgcagggaggag
gtggcggagctattgattggagataacctggactccgacaacgtaacgagtgaatcggag
tctgacactggcagcgatttcgaggacactttgaacaaaggaaggaaacagatggcctct
cgtccttccagggccccacccgccaagaggccaaagcatacaccagtggagaagaaagtg
gctccgcagaagaggaaccctggcaaacagcaaaagcctagccttgtacagcagtcaatc
agcctggcaaaggatgccccacagtcctccaggagatcaagacaagtgttggcagacagc
aaccagaaagtggttaaagacgctggtacagcatggttggacagcgatcaggagaccagt
aacctgtctgtcagcaccacccggtctcaaagtgcacggcagctctcgagatcaaggcgg
gtgccagcaaagagtaacccccagacagcggggaaagaaaatgtctcgatgcacccgagc
agtgatcaggaaacgagtaatctatcggtgagcgtcaggcagctgaaaagtatggctcag
tcctccaggaaagtgggacacgtgtcggccgcgaaagcgggacagaagtcgggtgtgaaa
gcagccgctccgggacaacagaaagaagccagcaacctgttcgaggcggtgaagcttgca
aaaagtgccatgcagaccctggttgacgaatggctggaggtttacaagctggacagagag
actggtctgctggaacttctgaacttcttcatccacagctgtgggtgtaaagggattatt
acctcacagatgttccacaagctgcaaaatgccgagatcatccggaaaatgactgaggaa
tttgatgaggacagcggtgattaccctctatcgatggcaggtcccatgtggaagaaattc
cgccagaatttctgtgaattcattaccgtgttggtgcgtcagtgtcagtacaatgtcatc
tacgatgaatatatggtggacgtactgatctccctgctgacaggactgtctgattctcag
gtccgagcgttccgacacaccagcacattggctgcaatgaagctaatgaccgcactggtg
gatgtggctttgaatctgaatggccatcaggaaaacatccagcgtcagtacgacactgag
cggaacaaagctgcagggaaacgggccaatgaccgtctggaaatgttgctgcagaaacgc
aaggagctccaacagaatcaggaagagattgagaacatgatgaatgcaatctttaagggg
gtgtttgtccaccgatatcgggatttgatcgcggagatccgcgctatctgtatggaggag
attggtgtgtggatgaagcgttatagcaactcgtttctcaacgacagctacctgaagtat
gttggctggatgttgcatgacaagcaacgggaggtgaggctgagatgtttgaagtccctc
cagaatctgtacgaaagcaaagaaatcactcagaaactggatctgttcaccaaccgattc
aaggacaggatggtgtcaatggtcctggatgtggattatgatgtcgcagtggaagcagtc
aggctattgactctcattctgcagaatactgaagatgtgctgacccatgaggagtgtgag
tgtgtttacccgctggtgtacgcctctcaccgacccactgcagctgctgctggacaattt
gtccacgtgaagctgcggaggcattatgacgcagaacgtgagaaggctctggccaaagac
catggaaggcggagtgtcaatggcgaattcattaaattggtgctcacctttttcctggag
agtgagctccatgagcactgtgcatacctagtagacagtctgtgggaccacgctggctca
gtcctgaaggactgggaagggatgacggagttgctcctggaggagatcggggacggtgag
gagggacttactgatcaggaggagagtgctctgattgaactgatggtgtgctcgatgcgg
caagcagtggagggccacccaccgattggccggcaatctggcaaaaagttcctgactgtc
aaagagaagaagcaacagatggacgatcgggttaaactgtctgagcatttaattgtcatc
attccacagctcctggccaagtactctgcagatgccgagaaagtcgcaaatctgctgctg
attcctggtttctttgatttggacgtttactgcagcaggcgactggagaagtatttggac
cttctgctcaagcagatccgggagattgtcgagaagcacacggagatggacgtgctggag
gcgtgtagccgggcgtactacaccctgtgcaacgaggagtacaccatccggaatcgtgtt
gacattgcacgcagtcaaatcgttgacacgctggtcgagatattcactcactccgtggag
gagctgctgcatgaggttggagagacagatgaggataacctgtacacagtggcgacatca
ctgaagagaatcacagctctttacaatgcccatgaccttaccagatgggagttgtttgat
aactgctgccgtgtcctggaacgagggattgacacaggggacgtcccagaacagatcatt
gtccaagcgttgctctgtgctcactttcacgtcctctggacgctggctgtcatctcggag
tattcagcaaccaaggagcaaatcatcagactgaggaagcaacggaacaaagtcttcata
atgtgtcagcacggcctgtccaatgtcagctccagagtgagagagcagtccttcatcctg
ctgtgtgacttgctggtaatcttcagctcgcagatgacgagggatggtcacgacgatctc
cagcccctggtcttcactgctgaccttccgctggtgtctgagttgctaagttttgtcatg
gaccatgtgtttgtggaactggaggaggatggagatgatgagacgttgaagattgagatg
ctgcacaagaggaggaatttcctggctggattctgtaaacttgtcatctacaacatggtg
gatctgaggaccgcagctgacatcttcaaacactacatgaaatactatggtgactatggt
gacattatcaaggagatgttggctaaagcacggctgattgataaagtggagtgtgccaag
actctcctgctcagtttacagcagttgttcaacgaactagtccaagatcagggccctgtc
atcgaccgatcctctgttgctttctgcaccattaaagatctcggcaggaggtttgcactg
acctttgggatagacctgatcaagagcaggcagtctgtggtctcgctgcatttggatggg
ataagattcgccttccagcagtatcatccgagtgcttcagacttgcctccccagaacctg
ctgttcctcgatgtcatcagtgaattctcagtcaaactgctgcgtcaggacaagaaggca
gtcctcggctacctggacaagacgttcccggctcccgtcaacctgagcacccagggctgg
ctcccgctgaccttgtaccgtcgctcgctgctggctcggggggaagatgacactgtgtct
gtgatcagcagcagaacgttgagtgcccgcagcaaaaaagcaccaacatcgtctgccaag
aggaggaggctggaagtttcagatctgagttcggatggtgtgtggctgcagagtggtggc
agcatgcccgtgggcggtaaactgagaactccgatactgacctcgaccatcctgagacca
ccccagtgggacacgagaagtctgcagagctctgatgaccaggattcggagaaggggtca
gagtctgaatttgcacaaagtcgttcctggcttgagtcgcaaagtcagaacaagaggcag
aacaagagagttcagaaggaccagcagcagaagaaccgaatgcgacagcggcacaagaaa
cagcagctgctcagtctgatggaggaagatggtgaagagtcagagacaggagaaatgata
tcagatgccacgagtgagcgttctgatgcaaacagcgagatcagtctggctccgccgatc
agacagggccgagccggtctgttgcaggatctgttcgactccagtattctcgacattgac
cgactgaccccccgatggtgcggtgcttcctcggtgctgactgacccttcgatggtgcgg
cgctccttcagcgccgactga
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