Chiloscyllium plagiosum (whitespotted bambooshark): 122544682
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Entry
122544682 CDS
T08871
Symbol
dnai1.2
Name
(RefSeq) dynein, axonemal, intermediate chain 1, paralog 2 isoform X1
KO
K10409
dynein axonemal intermediate chain 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122544682 (dnai1.2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cpla03037
]
122544682 (dnai1.2)
04812 Cytoskeleton proteins [BR:
cpla04812
]
122544682 (dnai1.2)
Cilium and associated proteins [BR:
cpla03037
]
Motile cilia and associated proteins
Dynein arm
122544682 (dnai1.2)
Cytoskeleton proteins [BR:
cpla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
122544682 (dnai1.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_HPS5
EIF3I
Beta-prop_WDR19_1st
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_RFWD3
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_Aladin
Beta-prop_LRRK2
Beta-prop_TEP1_2nd
DUF4191
Beta-prop_WDR75_1st
Beta-prop_ELP1_2nd
Motif
Other DBs
NCBI-GeneID:
122544682
NCBI-ProteinID:
XP_043539927
LinkDB
All DBs
Position
1:complement(46450853..46749057)
Genome browser
AA seq
688 aa
AA seq
DB search
MPLKTKTRSVTAPPPVPSAKAASKKSKKDDDDGTEMGDGDDWNLGKSLIKPPDQLDLTEQ
ELKEEITRVLTADNPHAPENIVRFSFKERAYKQVPVISQMAIHFARDGNLLHKDSDEAKR
QQSRGKLSEESDAEDISAPLPSESAEKMDTEEEELPDAKGAEEEEEKEVIRPRQERKIPN
QFNFSERASQTFNNPMRENGCQTEPPPRASFSSTANQWEIFDAYEEVLAKQAMKKEKQKP
HTVKKDEVSKKKISAVESMSDDISRVSKVAKIVERMVNQNSFDDILQDFKYFEDPSDEFR
DQEGTVLPLWKYFYEKAKRLAITSMCWNPKYHDLFAVGHGSYDFMKQNRGMLLVFSLKNP
THPEYQYSSDSSVLCLDFHNMYPHLIAVGFYDGCVAVYNIMENATGPTYKSSPKSGKHTD
PVWQVKWQKDDLDNNINFCSVSSDGRVVSWALIKDEIVYTDIIKLTMDGICKDALENLQL
QIMGCGTSFDFHKQKDNLFLVGTEEGKIHKCSKAYSSEFLDTYEAHHMAVDALHWNTFHP
EIFISCSSDWTVKIWDHNLKNPMFTFDLNAPVGDVTWSPYSSTVFAAVTTNGKVHVFDLN
VNKYEPICEQTIVNKKRNKLTHIAFNPTYPIIMVGDERGGVSILKLSPNLRKQPKAKKGQ
EVQKGPEVEIAKMDKLLSLVRDPDMKQN
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgccactgaaaactaaaacacgatcggttactgccccgcctccagtaccatctgctaaa
gctgcatcaaagaagtccaagaaggatgatgacgatggaactgaaatgggagatggagat
gactggaatttggggaagtcactcatcaaacctcctgatcagctggatcttactgaacaa
gaattaaaagaagaaattactcgtgttcttacagctgataacccccacgctcctgaaaat
attgtgagattcagctttaaagaaagggcttataagcaagtcccagtgatcagccagatg
gccattcattttgcacgtgatggaaacctactgcacaaagattcagatgaagcaaaacgt
cagcaatctagagggaaactttctgaagagagtgatgctgaagatattagtgcacctctt
ccatctgaaagtgcagagaaaatggatacagaagaggaagaactccctgatgcaaaggga
gctgaagaagaagaagagaaggaagtaataagaccacgacaggaacggaagattcccaat
cagttcaacttcagtgaaagagcttctcagactttcaacaatcctatgagggaaaatgga
tgccagacagaaccacctcccagagcaagtttctcttctacagcgaatcagtgggaaata
tttgatgcctatgaggaagtattagcaaaacaagcaatgaagaaagagaagcaaaagcca
catactgtgaaaaaagatgaagtatcaaagaaaaaaatttcagctgttgaaagcatgagt
gatgatatttcaagagttagtaaagttgccaaaatagtggaacggatggtgaaccagaac
tcttttgatgacattttacaagattttaagtattttgaagatccttctgatgaattccgg
gatcaagaaggcactgttctacctctgtggaaatatttttatgagaaagctaaaagattg
gcaattactagcatgtgttggaatccaaaataccatgatctttttgcagttggacatggc
tcctatgattttatgaaacagaaccgtggcatgcttctcgtattctcactgaaaaatcct
acccaccctgaataccaatatagttcagacagcagtgtcttatgcctggatttccacaat
atgtatcctcatctgatagctgttggcttttatgatggttgtgttgctgtctataatatc
atggaaaatgctacagggcctacttacaagagttcacctaaatcgggcaagcacactgat
cctgtttggcaggtaaaatggcaaaaagatgacttggacaataatatcaacttctgttcc
gtctcttcagatggacgggttgtttcttgggctttaattaaggatgaaattgtttataca
gatattatcaaacttacaatggatgggatttgcaaggatgcactggaaaatttgcaattg
caaattatgggatgtggaacttcctttgacttccataaacagaaggacaatttgtttcta
gtaggcacagaagaaggaaaaatacacaagtgctccaaggcttattcaagtgagtttttg
gatacttatgaagcccatcatatggcagtggatgccttacactggaatacattccatcca
gaaattttcatttcgtgtagttctgattggacagtgaagatttgggatcacaatttaaag
aacccaatgttcacgtttgatcttaatgcaccagtcggtgatgttacttggtcaccgtac
tcttcaactgtgtttgctgccgttacaacaaatggaaaggttcacgtttttgatttgaat
gttaataaatatgaaccgatctgcgagcaaactattgtgaacaagaaacgaaataaactc
acacatattgcattcaatccaacctaccctattataatggtaggagatgaacgtggtggt
gtatcaatcttaaaactctctccaaaccttcgcaaacaacctaaggcaaaaaaaggtcaa
gaagtacaaaaagggcctgaagtggaaatcgctaaaatggacaagctactgagcctagtt
agagacccggacatgaaacagaactaa
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