Chiloscyllium plagiosum (whitespotted bambooshark): 122544732
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Entry
122544732 CDS
T08871
Name
(RefSeq) integrin alpha-10-like isoform X1
KO
K06586
integrin alpha 10
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04510
Focal adhesion
cpla04512
ECM-receptor interaction
cpla04810
Regulation of actin cytoskeleton
cpla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122544732
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122544732
09142 Cell motility
04820 Cytoskeleton in muscle cells
122544732
04810 Regulation of actin cytoskeleton
122544732
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpla04515
]
122544732
Cell adhesion molecules [BR:
cpla04515
]
Integrins
Integrin alpha subunits
122544732
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_2
Integrin_A_Ig_3
Integrin_alpha
ITGAX-like_Ig_3
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
122544732
NCBI-ProteinID:
XP_043539973
LinkDB
All DBs
Position
51:complement(3399388..3450572)
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AA seq
561 aa
AA seq
DB search
MDVDGDGLIDVAVGAFGKAVIFGILRVVQVNASVTFSPPFINMLLRNCQRNDRDVTCVTA
TVCFTTRAKSPGLSNSTLDLYYNILLDEKKFAPRALFDGSDQRQKEEVIHLLTDGLKCHT
LHFHVIDTADYIRPIGFTLQFSLAEQPEGPILDDGCVTTVKNWIPFFKDCGDDDECLTDL
ALQAHLDISGSRQSPYIVKSYRQRVSAIVMLENRKENAYNTSLNITFSKNLLFTSLLVKD
DAQNKIECLVLSAHHRICNVSFPVFRSLMQVSFRMEFEFHCSHLLDEVELYISVSSDSTE
LNETLDDNTVYLWAAVQYEADLLLTSSESTLQRYEMQQAAESVPEEIRPDFNHTFKIKNL
GCFPAEGLEAKIYIPTMINAYYHISAVTTAFTEPVLGINCSMSNATDRLRANQDKATEVL
SRDFTYVNRLDCSNSWCSIFTCRMNTVDRSEEVVIHVGYMLYGKFFRTVKFRSLKIVTTL
TLDVQTSQVLTIAESARYREVIVELIKPVVIAVSLWIIIGSTLGGLLLLALIIFILWKCG
FFKRKQKEEDDEDKEEDEKKE
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggacggagatggattgatcgatgtggcagtgggagctttcggcaaggctgtc
atctttgggatactgcgtgtggtccaggtgaatgcctcagttacattcagtcctcccttc
atcaatatgctcctacggaactgccagagaaatgacagagatgtcacctgtgttactgcc
actgtctgtttcaccacaagagcaaagtcacccggactgagcaacagcaccctggatctg
tattataacattctgttggatgaaaagaagtttgctcccagggccttgtttgatggaagt
gaccagaggcagaaggaggaagttattcatcttctgaccgatggcctgaaatgtcacacc
cttcactttcacgtcattgatacagctgactacattcggcctattgggttcacactacag
tttagtttggctgaacagcctgaggggccaattctggatgatggttgtgtaactacagtt
aaaaactggattcccttctttaaagactgtggggacgatgatgaatgtttgacggacctt
gcgttgcaggcacacttggatatttcaggatctagacaaagtccttacattgtaaaaagc
tatcgacagagggtgtcagcaatagtgatgctggaaaacaggaaagaaaatgcttacaat
acaagcctcaacatcaccttttccaaaaacctgctcttcaccagtctccttgtgaaggat
gatgcacagaataagattgaatgtctggtgttatcggcacaccacaggatctgcaacgtc
agtttcccggtcttcagatctctgatgcaggtctcctttcgtatggagtttgagtttcat
tgttcacatctattggatgaagtggagctctacatcagtgttagcagtgacagtacagag
ctgaatgagacgcttgatgataacactgtgtacctgtgggcagctgtccagtatgaagca
gatctcctcctcaccagcagtgaatccactctccaacgttatgagatgcagcaggcagca
gagtcagtacctgaagaaatccgtccagactttaaccacaccttcaagatcaaaaacctg
ggctgctttcctgctgaaggtttggaagctaaaatctacattccgaccatgatcaacgca
tactatcacatttcagcagtgaccaccgcctttaccgagccagtcctgggaataaattgc
tccatgagcaatgctacagatcgactgagggcaaaccaagacaaagccacagaggtcctc
agcagggatttcacatacgtgaaccgcctggactgcagtaattcctggtgcagcattttc
acctgccgtatgaatactgtagacaggagtgaggaggtggtaattcacgttggctacatg
ctgtatggcaaattcttcaggacagtaaaattcagatcattgaaaattgtcactacgcta
actctggatgtacaaacttctcaggttctgacaattgcagagtcagctcgctatcgagag
gtgatcgtagagctgatcaagccagtggtgatcgctgtgtctctgtggattatcattggc
agcacactcggagggcttctgctgctggctctcatcatcttcattctgtggaagtgtgga
ttctttaagagaaaacaaaaggaggaagatgatgaggacaaggaggaggatgagaagaaa
gagtga
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