Chiloscyllium plagiosum (whitespotted bambooshark): 122544764
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Entry
122544764 CDS
T08871
Symbol
khdc4
Name
(RefSeq) KH homology domain-containing protein 4
KO
K25780
kelch domain-containing protein 4
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpla03041
]
122544764 (khdc4)
Spliceosome [BR:
cpla03041
]
Complex B
Other components
Prp19-related factors
122544764 (khdc4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
KH_12
KH_1
Motif
Other DBs
NCBI-GeneID:
122544764
NCBI-ProteinID:
XP_043540023
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All DBs
Position
51:2800252..2818159
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AA seq
510 aa
AA seq
DB search
CCLQATLPVKSVAAAAAKNKDDLVVAEVEINDVPINCRNLLTRGQTQDEVSRLTGAAVST
RGRFMAPEEKVQATPGDRALYLHIQGQTRDVVDKAVNRIKEIIAGGVIKAVSASGSQFNG
PMVTVYHQPAPVTHPTTTTAKSQAGMHYVQDKVFVGLEQIDPAFNIKEKVEGPGGSYLQH
IQAETGAKVFLRGKGSGCLEPASGREAFEPMYIYISHPKPEGLSAARKLCESLLQTVHSE
HSRFLSQMNSSVMPPQGYQQVPGAVPQQHYYPGQGYQARYPVGPIPLQSSQSSYPRPCGP
EAAQFPVSGAAQPLAVPGQQNPVVGNYATPLPVNTPAYDGMMGAPRPSTHLPPPQGHKRR
FTEESEEESALLGYQHGPIHMTNLGTGSSQTGRSGAGMVFADPCGRAKERDRQLMPPPPR
LLNEGFVQPEDQCGMYRPPASLDRLGEPSMKMRRMSERGSRLVSYGGDSSDEEEEHSRRR
QSMVQGWSAECRYTLPPQRAQQQMPFWMAP
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
tgttgtttgcaggcaacccttcctgtgaagagtgtggcagcagctgctgcgaaaaacaag
gatgacctggtggtcgctgaagtcgaaatcaatgatgttcccatcaactgtcgaaatctg
ctcacccgggggcagactcaggacgaggtcagccggctgactggagcagctgtgtctaca
cgagggcgattcatggcaccagaggagaaagtacaggctaccccaggcgatcgtgctctg
tatctgcacatccaagggcagactcgggatgttgttgacaaggctgtgaaccggattaaa
gagatcattgcaggtggagttataaaggctgttagtgcttccggctcgcagttcaatggt
ccaatggttactgtctatcaccagccagcccctgttactcatcctacaaccaccacagcg
aaatcacaagctgggatgcattatgttcaggataaagtttttgtgggtctggagcagatt
gatccagcttttaacattaaagagaaagtggaggggccaggcggatcctacctgcaacac
attcaggctgagactggtgccaaagttttcctgcgtgggaagggttcaggctgcctggag
cctgcctctgggagagaggcctttgaaccaatgtacatctatatcagtcatcccaaacca
gagggtctttcagctgcaaggaaactttgtgagagcttgctgcagactgtccacagtgag
cattccaggttcctaagtcaaatgaattcatcagtcatgccaccacaaggttaccagcag
gtacctggagctgtgccccagcagcattattaccctggccagggttaccaggccaggtac
ccagtgggccctattccgctacagtcctcacagagttcatatcccagaccatgtggtcct
gaagctgcacagttcccagtgtcgggagcagcacagcccctggctgtgcctgggcagcaa
aaccctgtggttggcaactacgccacgccattacctgtgaatacacctgcttatgatggg
atgatgggtgcaccgagaccctccactcacctccctccacctcagggccacaagagacgc
ttcactgaagagagtgaagaggaatcggcactgctgggctaccagcatggacccattcat
atgactaatttaggtacagggtcctctcagaccggacggagtggagctggtatggtcttc
gctgatccctgcggcagagccaaggagagggacaggcagctgatgcccccaccaccacga
cttctcaacgaaggattcgtgcagccagaagatcagtgtgggatgtacagacctccagcg
tctctggatcgtcttggggagccctcgatgaagatgaggaggatgagtgagaggggatcg
cggcttgtgtcctacggtggggattcgtcggatgaggaagaagaacattccagaaggagg
cagagtatggtgcagggctggagtgcagagtgccggtacacactacctcctcagcgagcc
cagcaacagatgcccttctggatggcaccgtag
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