Chiloscyllium plagiosum (whitespotted bambooshark): 122544773
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Entry
122544773 CDS
T08871
Symbol
thbs3a
Name
(RefSeq) thrombospondin-3a
KO
K04659
thrombospondin 2/3/4/5
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04145
Phagosome
cpla04510
Focal adhesion
cpla04512
ECM-receptor interaction
cpla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122544773 (thbs3a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122544773 (thbs3a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
122544773 (thbs3a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122544773 (thbs3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122544773 (thbs3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpla04147
]
122544773 (thbs3a)
00536 Glycosaminoglycan binding proteins [BR:
cpla00536
]
122544773 (thbs3a)
Membrane trafficking [BR:
cpla04131
]
Endocytosis
Phagocytosis
Opsonins
122544773 (thbs3a)
Exosome [BR:
cpla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122544773 (thbs3a)
Exosomal proteins of colorectal cancer cells
122544773 (thbs3a)
Exosomal proteins of bladder cancer cells
122544773 (thbs3a)
Glycosaminoglycan binding proteins [BR:
cpla00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122544773 (thbs3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
cEGF
EGF_3
EGF
Motif
Other DBs
NCBI-GeneID:
122544773
NCBI-ProteinID:
XP_043540034
LinkDB
All DBs
Position
51:complement(3842269..3889674)
Genome browser
AA seq
773 aa
AA seq
DB search
MSQPSDELQLSETTFSPVSTVIQAGHTEWQHLNGANSVLGDQTTALVNQLALFNQVLRDL
REDIREQVKEMSLIRNTILECQVCGFHDHRSKCDPSPCFETVECMETYEYPGFRCGSCPE
GFTGNGTHCTDIDECLFANPCFSESKCINAVPGFRCESCPLGYEGTIVAGVGVQYAMTTR
QVCSDIDECNDGNNGGCIINSLCTNTMGSFKCGPCRRGFVGNQTVGCVHQTSCSSAVVNP
CDVNAQCSIERNGEVSCHCRVGWAGNGYVCGTDTDIDGYPDQDLPCIDNHRHCKKDNCRY
TPNSGQEDADNDRVGDQCDNDADGDGIKNVEDNCRLVHNKDQQNSDADSFGDACDNCPNV
PNNNQKDTDNNGEGDACDNDIDGDGIPNLLDNCAGVPNPLQTDRDGDGVGDACDSCPEMS
NPTQTDADDDLVGDACDNNQDSDGDGHQDSKDNCPETPNSSQLDSDNDGLGDECDDDDDN
DGVPDYGPSGPDNCRLIVNPNQKDSDDNGIGDACENDFDNDAVFDQFDVCPESAEVTLTD
FRAYQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNT
VTDDDYAGFIFGYQDSSSFYVVMWKQTEQLYWQSTPFRAMAEPGLQLKAVKSKTGPGEYL
RNALWNTGTTQDQVTLLWKDPRDVGWKDKTSYRWQLVHRPQVGYIRVKLYEGPNLVADSG
VTIDTTMRGGRLGVFCFSQENIIWSNLRYRCNDTIPDDFEPFRKLLQLQMGAR
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagcctagtgatgaactccagttgtctgagacaaccttcagtcctgtatccaca
gtcattcaggctggtcatacagaatggcaacacttgaatggtgcaaattctgttctgggt
gaccagacaacagcactggtcaatcagttggctctttttaatcaggtcctccgtgacctg
agggaagatatccgtgagcaggtgaaggaaatgtcactgatacggaacaccatcctggag
tgtcaagtgtgtgggtttcatgaccatcggtccaagtgtgatcccagtccttgttttgaa
actgtggaatgtatggaaacctatgaataccctggtttccgctgtggatcctgtcctgaa
ggttttacgggaaacggcacacactgcaccgatattgatgagtgcctcttcgccaatccc
tgtttctctgaatccaaatgcataaacgcagtgccaggattccgctgtgagtcctgtccc
ttgggctatgaaggaacaattgtagctggtgttggagtgcaatatgcaatgacaacaagg
caggtttgctcagacatcgatgaatgcaatgatgggaataatggtggctgcataataaac
tccctctgcacaaatacaatgggttcgtttaaatgtggtccatgccggagggggtttgtt
ggaaaccagacagttggctgtgttcaccagacgtcatgcagcagtgccgtagtcaatcca
tgtgatgtcaacgcacagtgttccatcgaacgcaacggagaggtgtcctgccattgcaga
gttggctgggctggaaatggatatgtgtgtggaacagacacagatatcgatggctatccg
gaccaggacctgccctgcattgacaatcatcgtcactgtaagaaggataattgccggtat
accccgaattcaggtcaggaggatgctgataatgaccgtgttggagatcagtgtgacaat
gacgcagatggagatggcattaagaatgtcgaggataactgcaggctggtccataacaag
gatcagcagaactctgatgcagattcatttggagatgcgtgtgacaattgtcccaatgtt
cccaacaacaaccaaaaggacacagataacaatggagagggagatgcctgtgataatgac
attgacggagacggtattcctaatcttttggacaattgtgctggagttccaaatcctctc
cagacagacagggatggagatggagtcggagatgcatgtgacagctgtcctgagatgagt
aatcccacacagactgatgcagatgatgatcttgttggcgatgcttgtgataataatcaa
gacagtgatggcgatgggcatcaggactccaaagacaattgtccagaaactcctaacagc
tctcagttggactctgacaatgacgggttgggcgatgagtgtgatgatgatgatgacaat
gatggggttcctgactatgggccatcgggtcctgataattgccgcttaattgtgaacccc
aatcagaaggattctgatgataacgggattggtgatgcttgcgaaaatgactttgataat
gatgctgtctttgaccagtttgatgtctgtcctgagagtgcagaggtcactcttactgat
ttccgagcctatcagactgtcgttctggatcctgagggtgatgcacagattgacccaaat
tgggtagtcctcaaccagggaatggagattgttcagactatgaacagtgaccctggatta
gctgtcggttatactgcgttcaatggtgtggactttgaaggcacattccacgtgaatact
gtgacagatgatgattacgctggctttatctttggctaccaggacagttccagcttctat
gtggtgatgtggaaacagacagagcagttatactggcaatctacaccattccgtgcaatg
gctgagcctggtcttcagctcaaggccgtgaaatcaaagacaggcccaggagagtacctc
aggaatgcactgtggaatactggcaccacccaagaccaggtcacgctgctatggaaagat
ccccgtgatgtgggatggaaagacaagacatcctacagatggcagctggtgcacaggcca
caagtcggctatatcagagtcaaattgtatgaaggacctaatcttgtggcagattcaggc
gttacaattgatacaaccatgcgtggaggacgccttggtgtcttctgcttttcccaggag
aatattatttggtccaatctgcgctacaggtgtaatgacacaattcctgatgactttgag
ccatttcggaagttgctgcaactccagatgggagcacgctga
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