Chiloscyllium plagiosum (whitespotted bambooshark): 122545899
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Entry
122545899 CDS
T08871
Name
(RefSeq) collagen alpha-1(X) chain-like
KO
K19479
collagen type X alpha
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
Motif
Other DBs
NCBI-GeneID:
122545899
NCBI-ProteinID:
XP_043540711
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Position
3:complement(78328161..78338024)
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AA seq
635 aa
AA seq
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MVSNQITIFLVLLTLNVIHGMGYNAAYQRRGYGRSGSDEDDSYSSEEGVSRGPRGPRGYP
GPPGPQGPPGEPGVGLRGAPGSTGPRGPPGQSSAGKPGAPGASGKPGAKGSPGEKGDKGA
TGKPGENGSTGPRGPPGPPGLSIPGKPGSQGAPGRPGSPGAPGSKGKSGSPGQPGPKGEK
GSGAPGEQGEKGEPGPRGPPGPSGPKGIGKTGSPGPPGKPGSNGERGAPGSQGKPGAQGQ
KGSPGPPGQSRNGSPGPRGEPGSPGSPGPKGSAGQKGEPGMPGIGKPGNPGPRGERGPAG
SNGYPGETGKKGEPGQPGPQGPRGPYGPPGQDGPKGNPGQNGAPGPKGNPGPPGPQGFQG
SKGQPGPGGAPGKSGSPGIPGRPGSEGPQGLPGQKGDPGLSGAPGKSGSPGSPGAPGYPG
KEGMRGSAGPQGPRGPAGDQGSPGNPGERGEPGPPGPPGNPGNYYGKISGNIPGSPGREG
PPGPPGRPGPPGPPGKVATQSEKHKIPAFTAILSHSFSSTDQPVVFDKILINSNDNYDPS
TGIFTCKIPGIYQFFYHIHVKGASVWVGLYKNDEAVMYTFDDYKKDYIDQASGSAIISLR
KKDKVYIQLSSEEFNGLYSSEKKSSSFSGYLIVPS
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaaatcaaatcactatttttctggtattgcttacactgaatgtgatccatgga
atgggatacaatgctgcatatcagcgtcgcggttatggtcggagtggttcagacgaagat
gattcctacagttctgaagaaggagtatcaagagggccacgcgggccacgaggttatcca
ggtccaccaggcccacaaggtccaccgggagaaccaggagtcggactgagaggggctcct
ggtagtactgggccacgaggaccaccaggacagtcatctgctgggaaaccaggtgctcca
ggagcatcaggaaagcctggtgcaaagggatctcccggagagaaaggtgacaaaggagct
actgggaaaccgggagaaaatggcagtacaggaccaagaggacctcctggcccacctgga
ttatcaattcctggtaaaccaggttcccaaggggcaccaggtcgtccaggatcaccagga
gcacctggatcaaaaggcaagtctggaagtccaggtcaaccaggcccaaagggagaaaag
ggatctggagctccaggagaacaaggtgaaaaaggtgaaccaggaccaagagggccacca
ggtccatctggaccaaaaggaataggaaaaacagggtctcctggtcctcctggtaaacca
ggttccaatggggagagaggtgccccaggttcacaaggaaagccaggagcacaaggccag
aaagggtcaccaggtccacctggacaatcaagaaacggatctcctggacctagaggagaa
ccagggtcacctggatctcctgggccaaaaggctcagcaggtcaaaagggagaaccagga
atgccaggcattggtaaacctggaaatccaggaccaagaggagagcgcggccctgcaggc
tcaaatggttatcctggagaaactgggaaaaagggagagccaggtcaacctggaccacaa
ggaccacgaggaccgtatggcccaccaggtcaggacggtccaaaaggcaatccagggcaa
aatggtgcaccagggccaaaaggcaatccagggccaccaggaccacaagggtttcaagga
tcaaagggacaaccagggccaggtggtgcacctggaaagtcgggatctccaggaattcca
ggtagaccaggctcagagggtccacaaggacttcctggtcaaaaaggtgacccaggacta
tctggagcacctggtaaatcaggtagcccaggttcaccaggggcacctgggtaccctgga
aaagaaggaatgagagggtctgctggaccacaaggtccaagaggtccagctggagatcaa
ggatctcctggaaatccaggagaaagaggagagcctggtcctccaggtcctccaggtaac
ccaggtaattattatggaaaaatatcaggcaatatacctggttcacctggacgggaagga
cctccaggtcctccaggacgtcctggtccaccaggaccacctggaaaagttgctacgcaa
tcagagaaacataagataccagcatttacagccatcctgtctcattcgttttcatcgaca
gaccaaccagtggtgtttgacaaaatattaattaattcaaatgataattatgatccatct
actgggatttttacatgcaaaatacctggcatatatcaatttttttatcacatacatgtt
aagggagcaagtgtttgggttggattatacaaaaatgatgaagctgtaatgtatacattc
gatgactataaaaaggattatatcgatcaggcctcaggaagtgctataataagcttacgt
aagaaagacaaagtttacattcagctatcttcagaagaattcaatggtttgtattcatct
gaaaagaaaagttcttccttctcaggatatctaattgttccatcatga
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