Chiloscyllium plagiosum (whitespotted bambooshark): 122547061
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Entry
122547061 CDS
T08871
Symbol
prdm13
Name
(RefSeq) PR domain zinc finger protein 13 isoform X1
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122547061 (prdm13)
Transcription factors [BR:
cpla03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
122547061 (prdm13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_7th_ZNF462
zf-BED
Zf-C2H2_ZNF451
zf-C2H2_15
GPS2_interact
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
122547061
NCBI-ProteinID:
XP_043541584
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Position
3:87575029..87590838
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AA seq
625 aa
AA seq
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MQTPRSSAITVTADSTIPAGLRLGPVQGIFRLGKYMSDRKEHFNRKKVRFVRGHLVDEAG
DSVPEWIELIRAARHIQEQNLEAITDLPGGQIFYRTLRDIQPGEELAAWYSSTLAQWFDI
PTTATPTHDEKGEERYICWYCWRTFKYPNTLIAHIHFHCALSNGRGFINSEQCRISETFT
KSPKTADISSSSTPSRNGHHISSGPTEGAKRPASPVLTKMIMTKKAVGPEEEQDRALDMS
VNSARSHGALTTISGGTSSLVNAMGFHPGIRSAFKPTGLSKLISSDPSGDSGAKALGLGF
NKVVSSLKSPRSSGESMAGAHAAKCVHSIEPPLPAWPCSNTSRGFPLFPSFEETSAFKHV
ERGLHASLSPSRYTPIPTSVHFERFSIPPFEGGKPFAGECNIPIMPLTVYNGELLYSPPY
YPFKFHFSNLIKYPESVTYFGAPSLNPEIGSITNIDREIAMHTQQLSSIAAEKSRSRLES
MSTSSTSSGKPKKGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCKVCLRPFGDPSNLNK
HIRLHAEGNTPYRCEFCGKVLVRRRDLERHVKSRHPGQSLHKTESKTESSFDDPEQKSDH
SNESDVDVCFTDDQSDQDSGKNNDQ
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccccccggagctcggcgatcaccgtgaccgcggatagcaccatcccagccggt
ctgcgcttgggtcctgtgcagggcatttttaggctgggaaaatatatgtccgatcgcaag
gagcatttcaaccggaaaaaggtacgctttgtcagagggcatttggttgatgaagctggc
gattccgtcccggaatggatagagttaatccgagctgccagacacattcaagagcagaac
ctggaagcgatcactgaccttcctgggggacagatcttttacagaacgctgagggatatc
cagcctggggaggagttagcagcatggtattccagcactctggctcagtggttcgatata
ccaactacagccacaccgacacacgatgagaaaggggaggagcgttatatttgttggtac
tgctggagaacgttcaaatatccgaacactttaatagctcatatccacttccactgcgct
ctgagcaacggcaggggcttcatcaacagcgaacaatgccgaatttcagagactttcacc
aaatctccgaaaaccgccgatatatccagctcatcaacaccgtcgagaaatggccatcat
atctcctctggcccaacagaaggagctaaacgacctgcgtctccagttttgaccaaaatg
attatgaccaagaaggcagtgggacctgaggaggaacaggacagagccctggacatgagt
gttaattcagccaggagtcatggagctctgaccaccatcagcggcggcacctcctcactt
gtcaacgccatgggctttcaccccgggattagatccgcgtttaaacccacgggattatcg
aaattaatttcgtcggatccaagcggggacagcggcgctaaagcacttggattgggtttc
aataaagtggtgagcagtctgaaatcaccccgctcctctggagagagcatggcgggggcc
cacgcagccaaatgtgtccattccatcgagccgccgctgcctgcatggccatgcagcaac
accagcagaggcttccctctcttccccagttttgaagagacatctgcgttcaaacatgtc
gagaggggcctgcacgccagcttgtctcctagccgttacaccccgatcccaaccagcgtt
cactttgagaggttctccattcctccctttgaaggaggtaaacctttcgcaggagaatgc
aacattcccattatgcccttaacggtttacaatggcgagcttctgtacagtcctccctat
taccccttcaagttccacttcagcaacttaattaaataccccgaatccgtcacctacttt
ggagctccatctctcaacccagaaattggttccattaccaacatcgacagagagatcgcc
atgcacacgcagcaactgtcgagtatcgctgcagaaaagagcaggtcccgcctggagtcc
atgtccaccagcagcacgtccagtggcaagcccaaaaaaggtcacctctgcttgtactgt
gggaaactctactcccggaaatacggactgaaaatccacatgcggacgcacacagggtac
aaacctttaaaatgcaaagtttgccttcgaccctttggggatcccagcaacctaaacaaa
catatccgtttgcacgcggaggggaacacgccttacaggtgtgagttctgtggcaaggta
cttgtccgtcgcagagacttggaaaggcacgttaaatcaaggcacccggggcaaagtcta
cacaaaacagagagcaaaacggaatcatctttcgacgaccctgagcagaaaagtgaccac
agtaacgagagcgacgtagatgtctgctttacagatgatcaaagtgatcaagattcagga
aagaacaacgatcaatga
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