Chiloscyllium plagiosum (whitespotted bambooshark): 122547351
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Entry
122547351 CDS
T08871
Name
(RefSeq) protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
122547351
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpla01009
]
122547351
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpla04515
]
122547351
Protein phosphatases and associated proteins [BR:
cpla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122547351
Cell adhesion molecules [BR:
cpla04515
]
Cadherins
Protocadherins
122547351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
122547351
NCBI-ProteinID:
XP_043541919
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
ECELGRGCRLCPAPVLCELSDRVSFLQEPPPLLLLLLLLVLPGTGRAAELIYRVREESPA
GTYIGNLATDLRLNRSEPGVTYNLASAAGSGRFVDLNRETGELRTSAAVLDREELCPDPG
TGSLAEPCWLLLDVLLLPPRLFRLLKLRLRVEDVNDQAPRFPASSLGLSVPENAEPGSRY
PLEPAAEDPEPGLNGMLRYRLQGTGPAAYSGAFSLAQEDGAVPGKPAPFLVLAAPLDRES
RDRYVMELVAEDRGSPSLSGTATVTVSVSDVNDHCPEFPQSELRLSVFSNISVGSTVTRL
HAQDPDLGYNARVVYSYGERVPGSSSRLFRLDPVSGTIRLAAPIREGSARLHRLTVLATG
TGCAPVALTVSLNVIPVGVTGPPVLSPRYIALQADGVLYLKESEPPRTPLAFFTVTGDRE
PVRCYLHRGEAAAAFRLSRYQDLPGEYLLETGQPLDYELQRRYQVTVVGENADGLASRVH
LQIQLIDEND
NT seq
1471 nt
NT seq
+upstream
nt +downstream
nt
tgagtgtgagctgggtcggggttgcagactgtgtccagcgccggttctgtgtgaactctc
tgaccgagtttcctttctgcaggagccgccgccgctgctgctgttgttgctgttgctggt
cttaccgggcacgggccgggccgccgagctgatttaccgggtccgggaggagtcaccggc
gggcacctacatcggtaacctggccaccgacctgaggctgaaccggagcgagccgggagt
cacctataacctggcgtcggcggcgggctccggccgcttcgtggacctgaaccgggagac
cggggaactgcggacgtcggcggcggtgctggaccgggaggagctgtgcccggatcccgg
taccgggagcctggcggaaccgtgctggctgctgctcgatgtcctgctgctgcccccccg
cctgttccgcctcctcaagctccggctccgggtcgaggatgttaacgaccaggcgccgcg
gttccccgcctccagcctcggcctctcggtaccggagaacgcggagccgggctcccgcta
ccctctggaaccggcggccgaggacccggagcccggcctcaacgggatgctccgctaccg
gctgcaggggacgggccccgccgcctactccggcgccttctctctggcccaggaggacgg
cgcggtgccggggaagccggctcctttcctggtcctggcggcgccgctggaccgggagtc
ccgggatcggtatgtgatggagctggtggccgaggaccggggcagcccgagcctgtcggg
gacggccacggtaacggtgtcggtgagcgacgttaacgaccactgccccgagttcccgca
gagcgagctccgcctcagcgtgttctccaacatctcggtgggcagcaccgtcacccggct
gcatgcccaggaccccgacctcggatacaacgcccgggtcgtctactcgtacggggagcg
ggtccccgggagctccagccgcctgttccgcctggatccggtctccggtaccatccgcct
ggccgcccccatccgggagggcagtgcccgcttacaccggctcaccgtgctggctaccgg
caccggctgcgccccggtcgccctcaccgtcagcctgaacgttatcccggtgggggttac
cggacccccggtgctcagcccccggtacatcgccctgcaggcggacggcgtgctttacct
gaaggagagtgagcccccccggacccccttggccttcttcaccgttaccggggaccggga
gccggtccgctgctacctgcacagaggggaggcagcggcggctttccgcctgtcccggta
ccaggacctccccggtgagtacctcctggagaccgggcagcccctggactatgagctcca
gcggcgttaccaggtcacagtggtgggggagaacgcagacgggctagccagcagggtcca
cctccaaatccaactcatcgacgagaacgac
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