KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122548209
Entry
122548209         CDS       T08871                                 
Name
(RefSeq) RNA-binding protein MEX3B-like
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpla03019]
    122548209
   04121 Ubiquitin system [BR:cpla04121]
    122548209
Enzymes [BR:cpla01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122548209
Messenger RNA biogenesis [BR:cpla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122548209
Ubiquitin system [BR:cpla04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122548209
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 zf-RING_2 zf-C3HC4_2 zf-C3HC4 RING_XB3-XBAT31 KH-I_KHDC4-BBP Prok-RING_4 KH_DEAH11_2nd zf-RING_UBOX KH_2
Other DBs
NCBI-GeneID: 122548209
NCBI-ProteinID: XP_043542688
LinkDB
Position
Unknown
AA seq 390 aa
MALSLSVRAAGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRREDVAMARREIISAAEHFS
LIRASRNKDGPAAPGAVPVPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYI
VTPSRDKEPVFEVTGMPANVDRAREEIEAHIAVRTGGMLEFNDENDFHCNGTEAGFGSGG
RAPRPWAKLALPAGRKPLACFRGNGPDPYYGKPSDVHHHQHHHQHHACYANGATYGEAYF
GADGREGPSDAHLWEPPAQRRASGTVALPRLSPEVCHPLARRAHSDPLRGSGLPGAAHPP
PPAPQPPSGGADSPPPPSPAASAAPPHPSPRQGAGGRECQVCFESEVTAALVPCGHNLFC
MECANRICQRSNPHCPACLSSVTQAIRIFS
NT seq 1173 nt   +upstreamnt  +downstreamnt
atggctctctctctctctgtccgcgctgcaggttgcaagatcaaagcgctgcgggccaag
accaacacctatatcaaaacgccggtgcgcggcgaggagccggtcttcgtggtgaccggc
cggcgcgaagacgtggccatggcgcgccgggagatcatctccgccgccgagcacttctcc
ctgatccgcgcctcccgcaacaaggacggcccggccgcgcccggggcggtgccagtgccc
cccaacctgcccggccagaccaccatccaagtgcgggtcccgtaccgggtggtggggctg
gtggtggggcccaagggggccaccatcaaacgcatccagcagcagacccacacctacatc
gtgacgccgagccgggacaaggagccggtcttcgaggtgaccggcatgcccgccaacgtg
gaccgggcccgggaggagatcgaggcccacatcgccgtccggacaggcggcatgctggag
ttcaacgatgagaacgacttccactgcaatgggacggaggccggattcggcagcggcggg
cgggcccccaggccctgggccaagttggcgctacccgccggccgcaagcccttggcctgt
ttccgcggcaacggcccggacccctactacggcaagccgtcggacgtgcatcaccatcag
caccaccaccagcaccacgcctgctacgccaatggtgccacctatggggaggcctatttc
ggcgccgacgggcgggagggcccctccgacgcccacctctgggagccccccgcccagcgc
cgggccagcggaaccgtcgccctgccccgcctctcgcccgaagtctgccacccgctggcc
cgcagggcgcacagcgaccccttgcgggggagcggcctgcccggcgccgcccacccgccc
cctcctgctccccagccccccagcggcggagccgacagcccacctcctccctcccccgcg
gcttcggcggcaccaccccacccctccccccgccagggggccggggggcgggagtgccag
gtctgcttcgaaagcgaggtgacggctgccctggtgccctgtgggcacaacctcttctgc
atggagtgcgccaaccgcatctgccaacgcagcaacccccactgcccagcatgtctcagc
tccgtcacccaggccattcgcatcttctcctga

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