Chiloscyllium plagiosum (whitespotted bambooshark): 122548417
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Entry
122548417 CDS
T08871
Symbol
atg5
Name
(RefSeq) autophagy protein 5 isoform X1
KO
K08339
autophagy-related protein 5
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04136
Autophagy - other
cpla04140
Autophagy - animal
cpla04216
Ferroptosis
cpla04621
NOD-like receptor signaling pathway
cpla04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122548417 (atg5)
04136 Autophagy - other
122548417 (atg5)
09143 Cell growth and death
04216 Ferroptosis
122548417 (atg5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122548417 (atg5)
04622 RIG-I-like receptor signaling pathway
122548417 (atg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122548417 (atg5)
03029 Mitochondrial biogenesis [BR:
cpla03029
]
122548417 (atg5)
Membrane trafficking [BR:
cpla04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
122548417 (atg5)
Mitochondrial biogenesis [BR:
cpla03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122548417 (atg5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_UblB
ATG5_HBR
DUF6782
Motif
Other DBs
NCBI-GeneID:
122548417
NCBI-ProteinID:
XP_043542976
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All DBs
Position
3:complement(109285391..109442873)
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AA seq
275 aa
AA seq
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MTDDRDVLRDVWFGRIPTCFTLSQDEITEREAEPYYLLLPRVSYLMLVTDKAKKHFQKVM
RQEDVGEMWFEYEGVPLKWHYPIGLLFDLHASNTALPWNIIVHFKNFPESELLHCLTKDA
VEAHFMSCVKEADALKHKSQVINEMQKKDHKQLWMGLQNDKFDQFWAINRKLMEYPTEEG
GFRYIPFRIYQPLNERPFIQKLFRPISSEGHPHNLGDLLKEMFPAAVTPEDMEKQYQVVI
HGIEPMLETPVQWLSEHLSYPDNFLHISIIPLPRD
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgacagagatgtattacgggacgtttggtttggaagaataccaacctgtttc
actttatctcaggatgaaataactgaaagagaggctgaaccttattatctgctgttacca
agagtgagttatttgatgctggtcactgacaaagctaaaaagcacttccagaaagtaatg
agacaagaggatgtaggagagatgtggtttgagtatgaaggagtaccattgaagtggcat
tatccaattgggttactttttgaccttcatgcatcgaacactgcactaccatggaacatt
atagtacatttcaagaacttccctgaatcggaactgcttcattgcctcacaaaagatgct
gttgaagctcattttatgtcttgcgttaaagaagctgatgccttaaagcacaaaagtcaa
gtaatcaatgagatgcagaaaaaggatcataaacaactctggatgggcttgcaaaatgat
aagtttgaccagttttgggccatcaatcgaaaacttatggagtatccaacagaggaagga
ggattccgatatattcctttcaggatatatcagccattaaatgagcggccatttattcag
aaactatttcgcccaattagttcagaaggacatccacataatcttggtgacttgttgaaa
gaaatgttccctgctgctgtaactcctgaagatatggagaaacagtatcaagtagtgatt
cacggaattgaaccaatgctggaaacaccagtacaatggctcagtgaacatctgagctac
ccagacaattttctgcacattagtatcattcctttacctagagactga
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